Top downloaded articles published in 2022

13 February 2023
7 March 2023

Table of Contents

Open Access

Single-cell RNA sequencing technologies and applications: A brief overview

Single-cell RNA sequencing technologies and applications: A brief overview

  1. This review provides a concise summary of the single-cell RNA sequencing technologies.
  2. Overview and guidelines for planning experimental procedures are presented.
  3. Bioinformatics tools for scRNA-seq data analysis are thoroughly discussed.
  4. Applications and further development of scRNA-seq technology are highlighted.

Open Access

Spatial omics: Navigating to the golden era of cancer research

Spatial omics: Navigating to the golden era of cancer research

  1. Spatial omics is transforming our understanding of the cancer ecosystem at the systemic level.

  2. The integration of spatial omics and single-cell omics can fundamentally improve our understanding of tumourigenesis and cancer microenvironment.

  3. Generating the spatial atlas of human cancers across multiple omics and timescales will potentially pioneer the revolution of spatiotemporal molecular medicine.

Open Access

Revealing the transcriptional heterogeneity of organ-specific metastasis in human gastric cancer using single-cell RNA Sequencing

Revealing the transcriptional heterogeneity of organ-specific metastasis in human gastric cancer using single-cell RNA Sequencing

1) Single-cell RNA-seq of organ-specific metastasis (liver, peritoneum, ovary, lymph node) in GC was conducted.

2) Single-cell analysis determined phenotypes and functions of four malignant epithelial subtypes in GC.

3) A 20-gene signature of lymph node-derived exhausted CD8+ T cells might forecast lymph node metastasis, and targeting HLA-E-KLRC1/KLRC2 signaling severs as a novel clinical therapeutic opportunity for GC.

Open Access

Multi-omic landscaping of human midbrains identifies disease-relevant molecular targets and pathways in advanced-stage Parkinson's disease

Multi-omic landscaping of human midbrains identifies disease-relevant molecular targets and pathways in advanced-stage Parkinson's disease

Midbrain samples of Parkinson's disease (PD) and control (CTR) patients were subjected to a multi-omic analysis. The expression of miRNAs, transcripts and proteins was explored, followed by data integration and functional analyses. This comprehensive assessment of PD-affected and CTR human midbrains revealed multiple molecular targets and networks that are relevant to the disease mechanism of advanced PD.

Open Access

The N6-methyladenosine modification enhances ferroptosis resistance through inhibiting SLC7A11 mRNA deadenylation in hepatoblastoma

The N6-methyladenosine modification enhances ferroptosis resistance through inhibiting SLC7A11 mRNA deadenylation in hepatoblastoma

  1. Upregulation of SLC7A11 promotes hepatoblastoma tumorigenesis by enhancing ferroptosis resistance.
  2. METTL3/IGF2BP1/m6A modification enhances the SLC7A11 mRNA stability and expression via inhibiting the deadenylation in an m6A-dependent manner.
  3. The competitive binding of IGF2BP1 blocks PABPC1 from recruiting the BTG2/CCR4-NOT complex, thereby suppressing the deadenylation of SLC7A11 mRNA.

Open Access

Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single-cell sequencing

Molecular mechanisms governing circulating immune cell heterogeneity across different species revealed by single-cell sequencing

Our study compared the single-cell transcriptomes of immune cells from 12 species. The results revealed the heterogeneity and compositions of circulating immune cells. We explored the conserved and divergent cellular crosstalks and genetic regulatory networks among vertebrate immune cells.