Proteins: Structure, Function, and Bioinformatics: Vol 89, No 11

Free Access

Cover Image, Volume 89, Issue 11

Shiliang Li, Chaoqian Cai, Jiayu Gong, Xiaofeng Liu, Honglin Li,

Page: C1
First Published: 05 October 2021

Front Cover: The cover image is based on the Original Article A fast protein binding site comparison algorithm for proteome-wide protein function prediction and drug repurposing by Honglin Li et al., https://doi.org/10.1002/prot.26176

Free Access

Issue Information - Table of Content

Pages: 1397-1398
First Published: 05 October 2021

A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors

Natalia Kozlyuk, Benjamin A. Gilston, Lauren E. Salay, Rocco D. Gogliotti, Plamen P. Christov, Kwangho Kim, Mohiuddin Ovee, Alex G. Waterson, Walter J. Chazin,

Pages: 1399-1412
First Published: 22 June 2021

Characterization of glucose-binding proteins isolated from health volunteers and human type 2 diabetes mellitus patients

Wentian Chen, Yaogang Zhong, Jian Shu, Hanjie Yu, Zhuo Chen, Xiameng Ren, Ziye Hui, Zheng Li,

Pages: 1413-1424
First Published: 24 June 2021

Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease

Merve Yuce, Erdem Cicek, Tugce Inan, Aslihan Basak Dag, Ozge Kurkcuoglu, Fethiye Aylin Sungur,

Pages: 1425-1441
First Published: 24 June 2021

The amounts of thermal vibrations and static disorder in protein X-ray crystallographic B-factors

Hyuntae Na, Konrad Hinsen, Guang Song,

Pages: 1442-1457
First Published: 26 June 2021

RosettaCM for antibodies with very long HCDR3s and low template availability

Pranav Kodali, Clara T. Schoeder, Samuel Schmitz, James E. Crowe , Jr., Jens Meiler,

Pages: 1458-1472
First Published: 26 June 2021

Conserved features of the MlaD domain aid the trafficking of hydrophobic molecules

Angshu Dutta, Monika Chandravanshi, Shankar Prasad Kanaujia,

Pages: 1473-1488
First Published: 30 June 2021

SidechainNet: An all-atom protein structure dataset for machine learning

Jonathan Edward King, David Ryan Koes,

Pages: 1489-1496
First Published: 02 July 2021

Open Access

On the diversity of F₄₂₀-dependent oxidoreductases: A sequence- and structure-based classification

María Laura Mascotti, Maximiliano Juri Ayub, Marco W. Fraaije,

Pages: 1497-1507
First Published: 03 July 2021

Design and characterization of a novel dimeric blood–brain barrier penetrating TNFα inhibitor

Viana Manrique-Suárez, Luis Macaya, Maria Angélica Contreras, Natalie Parra, Rafael Maura, Alaín González, Jorge R. Toledo, Oliberto Sánchez,

Pages: 1508-1521
First Published: 04 July 2021

Iterated local search with partition crossover for computational protein design

François Beuvin, Simon de Givry, Thomas Schiex, Sébastien Verel, David Simoncini,

Pages: 1522-1529
First Published: 06 July 2021

Open Access

Ligand Binding Site Comparison — LiBiSCo — a web-based tool for analyzing interactions between proteins and ligands to explore amino acid specificity within active sites

Sameer Hassan, Mats Töpel, Henrik Aronsson,

Pages: 1530-1540
First Published: 09 July 2021

A fast protein binding site comparison algorithm for proteome-wide protein function prediction and drug repurposing

Shiliang Li, Chaoqian Cai, Jiayu Gong, Xiaofeng Liu, Honglin Li,

Pages: 1541-1556
First Published: 10 July 2021

A trivalent TNF-R2 as a new tumor necrosis factor alpha-blocking molecule

María A. Contreras, Luis Macaya, Viana Manrique, Frank Camacho, Alain González, Raquel Montesinos, Jorge R. Toledo, Oliberto Sánchez,

Pages: 1557-1564
First Published: 11 July 2021

Evolutionary models of amino acid substitutions based on the tertiary structure of their neighborhoods

Elias Primetis, Spyridon Chavlis, Pavlos Pavlidis,

Pages: 1565-1576
First Published: 18 July 2021

Open Access

Motions around conserved helical weak spots facilitate GPCR activation

Janne M. Bibbe, Gert Vriend,

Pages: 1577-1586
First Published: 17 July 2021

In-silico screening and microsecond molecular dynamics simulations to identify single point mutations that destabilize β-hexosaminidase A causing Tay-Sachs disease

Ahmad Almanasra, Brandon Havranek, Shahidul M. Islam,

Pages: 1587-1601
First Published: 20 July 2021

Free Access

Issue Information - Forthcoming

Page: 1602
First Published: 05 October 2021

Free Access

Cover Image, Volume 89, Issue 11

Page: C4
First Published: 05 October 2021

Sign up for email alerts

Enter your email to receive alerts when new articles and issues are published.

Email address

Please select your location and accept the terms of use.

Country or location

I consent to Wiley Online Library’s Terms of Use and processing of my personal data as disclosed in Wiley’s Privacy Policy.I consent to my personal information being transferred outside of the People’s Republic of China as laid out in Wiley’s Privacy Policy.*(Optional) I consent to special offers, newsletter & promotions from Wiley. See Privacy Policy for more details.

Tools

Journal Metrics

Subscribe to this journal

Proteins: Structure, Function, and Bioinformatics

Journal list menu

Tools

Follow journal

Proteins: Structure, Function, and Bioinformatics: Volume 89, Issue 11

ISSUE INFORMATION - COVER IMAGE

Cover Image, Volume 89, Issue 11

TABLE OF CONTENT

Issue Information - Table of Content

RESEARCH ARTICLES

A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors

Characterization of glucose-binding proteins isolated from health volunteers and human type 2 diabetes mellitus patients

Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease

The amounts of thermal vibrations and static disorder in protein X-ray crystallographic B-factors

RosettaCM for antibodies with very long HCDR3s and low template availability

Conserved features of the MlaD domain aid the trafficking of hydrophobic molecules

SidechainNet: An all-atom protein structure dataset for machine learning

On the diversity of F₄₂₀-dependent oxidoreductases: A sequence- and structure-based classification

Design and characterization of a novel dimeric blood–brain barrier penetrating TNFα inhibitor

Iterated local search with partition crossover for computational protein design

Ligand Binding Site Comparison — LiBiSCo — a web-based tool for analyzing interactions between proteins and ligands to explore amino acid specificity within active sites

A fast protein binding site comparison algorithm for proteome-wide protein function prediction and drug repurposing

A trivalent TNF-R2 as a new tumor necrosis factor alpha-blocking molecule

Evolutionary models of amino acid substitutions based on the tertiary structure of their neighborhoods

Motions around conserved helical weak spots facilitate GPCR activation

In-silico screening and microsecond molecular dynamics simulations to identify single point mutations that destabilize β-hexosaminidase A causing Tay-Sachs disease

ISSUE INFORMATION - FORTHCOMING

Issue Information - Forthcoming

ISSUE INFORMATION - COVER IMAGE

Cover Image, Volume 89, Issue 11

Tools

More from this journal

About Wiley Online Library

Help & Support

Opportunities

Connect with Wiley

Proteins: Structure, Function, and Bioinformatics

Journal list menu

Tools

Follow journal

Proteins: Structure, Function, and Bioinformatics: Volume 89, Issue 11

Download PDFs

ISSUE INFORMATION - COVER IMAGE

Cover Image, Volume 89, Issue 11

TABLE OF CONTENT

Issue Information - Table of Content

RESEARCH ARTICLES

A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors

Characterization of glucose-binding proteins isolated from health volunteers and human type 2 diabetes mellitus patients

Repurposing of FDA-approved drugs against active site and potential allosteric drug-binding sites of COVID-19 main protease

The amounts of thermal vibrations and static disorder in protein X-ray crystallographic B-factors

RosettaCM for antibodies with very long HCDR3s and low template availability

Conserved features of the MlaD domain aid the trafficking of hydrophobic molecules

SidechainNet: An all-atom protein structure dataset for machine learning

On the diversity of F420-dependent oxidoreductases: A sequence- and structure-based classification

Design and characterization of a novel dimeric blood–brain barrier penetrating TNFα inhibitor

Iterated local search with partition crossover for computational protein design

Ligand Binding Site Comparison — LiBiSCo — a web-based tool for analyzing interactions between proteins and ligands to explore amino acid specificity within active sites

A fast protein binding site comparison algorithm for proteome-wide protein function prediction and drug repurposing

A trivalent TNF-R2 as a new tumor necrosis factor alpha-blocking molecule

Evolutionary models of amino acid substitutions based on the tertiary structure of their neighborhoods

Motions around conserved helical weak spots facilitate GPCR activation

In-silico screening and microsecond molecular dynamics simulations to identify single point mutations that destabilize β-hexosaminidase A causing Tay-Sachs disease

ISSUE INFORMATION - FORTHCOMING

Issue Information - Forthcoming

ISSUE INFORMATION - COVER IMAGE

Cover Image, Volume 89, Issue 11

Sign up for email alerts

Tools

More from this journal

On the diversity of F₄₂₀-dependent oxidoreductases: A sequence- and structure-based classification