Epigenetic changes play critical role in age-associated dysfunctions of the liver
Jingling Jin
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorGuo-Li Wang
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorPolina Iakova
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorXiurong Shi
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorSimon Haefliger
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorMilton Finegold
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorNikolai A. Timchenko
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorJingling Jin
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorGuo-Li Wang
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorPolina Iakova
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorXiurong Shi
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorSimon Haefliger
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorMilton Finegold
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorNikolai A. Timchenko
Department of Pathology and Immunology, Baylor College of Medicine, Houston, TX 77030, USA
Search for more papers by this authorSummary
CCAAT/Enhancer Binding Proteins family proteins are important regulators of liver functions. Here, we show the critical role of C/EBPα-mediated chromatin remodeling in the age-associated dysfunctions of the liver and in the maintenance of physiological homeostasis. Because ph-S193 isoform of C/EBPα is increased in livers of old mice, we have generated C/EBPα-S193D knockin mice, which mimic the ph-S193 isoform of C/EBPα. Analyses of these mice showed that the S193D mutation causes chromatin remodeling leading to histological appearance of ‘foci-like’ nodules, which are also observed in livers of old mice. These ‘foci-like’ structures contain K9 trimethylated histone H3, a marker of heterochromatin. The increase of heterochromatin regions in S193D mice correlates with the elevation of S193D-C/EBPα-HDAC1 complexes and with dys-regulation of gene expression including epigenetic silencing of cyclin D1 and D2 promoters and the inhibition of liver proliferation. The elimination of C/EBPα-HDAC1 complexes in S193D mice by inhibition of HDAC1 corrects chromatin structure and normalizes expression of cyclin D1 and D2. We found that epigenetic dys-regulation is also associated with the elevation of C/EBPβ and with the increase of C/EBPα/β heterodimers in S193D mice. The C/EBPα/β heterodimers activate transcription of Glut4 and increase the levels of Glut4. As the result, S193D livers have accelerated uptake of glucose and accumulation of glycogen in the liver. Thus, this study demonstrates that the phosphorylation of C/EBPα at S193 leads to the appearance of heterochromatin regions, which correlates with the development of age-related dysfunctions of the liver.
Supporting Information
Fig. S1 GH-mediated elimination of C/EBPα-HDAC1 complex reduces size of the nuclei and alters chromatin structure of the nuclei in hepatocytes of old mice.
Fig. S2 The cyclin D1 promoter contains binding site for C/EBPα.
Fig. S3 (A) Cyclin D3-cdk4-mediated phosphorylation of C/EBPα at S193 enhances the ability of C/EBPα to activate the Glut4 promoter. (B) Phosphorylation of endogenous C/EBPa in Hep3B2 activates the Glut4 promoter.
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References
- Bandyopadhyay B, Curry JL, Lin Q, Richards HW, Chen D, Hornsby P, Timchenko NA, Medrano EE (2007) Dynamic assembly of chromatin during cellular senescence: implications for the growth arrest of human melonocytic nevi. Aging Cell 6, 577–591.
- Benko T, Frede S, Gu Y, Best J, Baba HA, Schlaak JF, De Groot H, Fandrey J, Rauen U (2010) Glycine pretreatment ameliorates liver injury after partial hepatectomy in the rat. J. Invest. Surg. 1, 12–20.
- Bucher NLR, Glinos MN, Di Troi F (1964) The influence of age upon the incorporation of thymidine-2C14 into the DNA of regenerating rat liver. Cancer Res. 24, 509–512.
- Chipchase MD, O’Neill M, Melton DW (2003) Characterization of premature liver polyploidy in DNA repair (Ercc1)-deficient mice. Hepatology 38, 958–966.
- Conboy IM, Conboy MJ, Wagers AJ, Girma IR, Weisman IL, Rando TA (2005) Rejuvenation of aged progenitor cells by exposure to a young systemic environment. Nature 43, 760–764.
- Corbin IR, Buist R, Volotovskyy V, Peeling J, Zhang M, Minuk GY (2002) Regenerative activity and liver function following partial hepatectomy in the rat using (31)P-MR spectroscopy. Hepatology 36, 345–353.
- Demarco IA, Periasamy A, Broker CF, Day RN (2006) Monitoring dynamic protein interactions with photoquencing FRET. Nat. Methods 7, 519–524.
- Eipel C, Abshagen K, Ritter J, Cantré D, Menger MD, Vollmar B (2010) Splenectomy improves survival by increasing arterial blood supply in a rat model of reduced-size liver. Transpl. Int. doi:10. 1111/j.1432-2277.2010.01079.x.
- Fausto N, Campbell JS, Riehle KJ (2006) Liver regeneration. Hepatology 43, S43–S53.
- Fry M, Silber J, Loeb LA, Martin GM (1984) Delayed and reduced cell replication and diminishing levels of DNA-polymerase alpha in regenerating liver of aging mice. J. Cell. Physiol. 118, 225–232.
- Gielchinsky V, Laufer N, Weitman E, Abramovitch R, Granot Z, Bergman Y, Pikarsky E (2010) Pregnancy restores the regenerative capacity of the aged liver via activation of an mTORC1-controlled hyperplasia/hypertrophy switch. Genes Dev. 24, 543–548.
- Iakova P, Awad SS, Timchenko NA (2003) Aging reduces proliferative capacities of liver by switching pathways of C/EBPα growth arrest. Cell 113, 495–506.
- Jin J, Wang G-L, Shi X, Darlington GJ, Timchenko NA (2009a) The age-associated decline of GSK3β plays a critical role in the inhibition of liver regeneration. Mol. Cell. Biol. 29, 3867–3880.
- Jin J, Wang G-L, Salisbury E, Timchenko LT, Timchenko NA (2009b) GSK3β-cyclin D3-CUGBP1-eIF2 pathway in aging and in Myotonic Dystrophy. Cell Cycle 15, 2356–2359.
- Jin J, Wang G-L, Timchenko LT, Timchenko NA (2009c) GSK3β and aging liver. Aging 6, 582–585.
- Johnson PF (2005) Molecular stop signs: regulation of cell-cycle arrest by C/EBP transcription factors. J. Cell Sci. 118, 2545–2555.
- Krupczak-Hollis K, Wang X, Dennewitz MB, Costa RH (2003) Growth hormone stimulates proliferation of old-aged regenerating liver through forkhead box m1b. Hepatology 38, 1552–1562.
- Kuk JL, Saunders TJ, Davidson LE, Toss R (2009) Age-related changes in total and regional fat distribution. Ageing Res. Rev. 4, 339–348.
- Michalopoulos GK (2007) Liver regeneration. J. Cell. Physiol. 213, 286–300.
- Miller M, Shuman JD, Sebastian T, Dauter Z, Johnson PF (2003) Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer binding protein alpha. J. Biol. Chem. 278, 15178–15184.
- Moser MJ, Gong Y, Zhang MN, Johnston J, Lipschitz J, Minuk GY (2001) Immediate-early protooncogene expression and liver function following various extents of partial hepatectomy in the rat. Dig. Dis. Sci. 46, 907–914.
- Muller K, Calkhoven CF, Sha X, Leutz A (2004) The CCAAT/enhancer binding protein α (C/EBPα) requires a SWI/SNF complex for proliferation arrest. J. Biol. Chem. 297, 7353–7358.
- Narita M, Nunez S, Heard E, Lin AW, Hearn SA, Spector DL, Hannon GJ, Lowe SW (2003) Rb-mediated heterochromatin formation and silencing of E2F target genes during cellular cenescence. Cell 113, 703–716.
- Pedersen TA, Kowenz-Leutz E, Leutz A, Nerlov C (2001) Cooperation between C/EBPα, TBP/TFIIB and SWI/SNF recruiting domains is required for adipocyte differentiation. Genes Dev. 15, 3208–3216.
- Schmucker DL (2005) Age-related changes in liver structure and functions: implications for disease? Exp. Gerontol. 40, 650–659.
- Sedivy JM, Banumathy G, Adams PD (2008) Aging by epigenetics – A consequence of chromatin change? Exp. Cell Res. 314, 1909–1917.
- Seo Y-H, Jung H-L, Shin H-T, Kim Y-M, Yim H, Chung H-Y, Lim IK, Yoon G (2008) Enhanced glycogenesis is involved in cellular senescence via GSK/GS modulation. Aging Cell 7, 894–907.
- Tan EH, Hooi SC, Laban M, Wong E, Ponniah AW, Wang N-D (2005) CCAAT/enhancer binding protein α knock-in mice exhibit early liver glycogen storage and reduced susceptibility to hepatocellular carcinoma. Cancer Res. 65, 10330–10337.
- Timchenko NA (2009) Aging and liver regeneration. Trends Endocrinal Metab. 20, 171–176.
- Timchenko NA, Harris TE, Wilde M, Bilyeu TA, Burgess-Beusse BL, Finegold MJ, Darlington GJ (1997) CCAAT/enhancer binding protein alpha regulates p21 protein and hepatocyte proliferation in newborn mice. Mol. Cell. Biol. 17, 7353–7361.
- Wang ND, Finegold MJ, Bradley A, Ou CN, Abdelsayed SV, Wilde M, Taylor LR, Wilson DR, Darlington GJ (1995) Impaired energy homeostasis in C/EBP alpha knockout mice. Science 269, 1108–1112.
- Wang H, Iakova P, Wilde M, Welm A, Goode T, Roesler WJ, Timchenko NA (2001) C/EBPα arrests cell proliferation through direct inhibition of cdk2 and cdk4. Mol. Cell 8, 817–828.
- Wang G-L, Iakova P, Wilde M, Awad SS, Timchenko NA (2004) Liver tumors escape negative control of proliferation via PI3K/Akt-mediated block of C/EBPα growth inhibitory activity. Genes Dev. 18, 912–925.
- Wang G-L, Shi X, Salisbury E, Sun Y, Albrecht JH, Smith RG, Timchenko NA (2006) Cyclin D3 maintains growth inhibitory activity of C/EBPα by stabilizing C/EBPα-cdk2 and C/EBPα-Brm complexes. Mol. Cell. Biol. 26, 2570–2582.
- Wang G-L, Shi X, Salisbury E, Sun Y, Albrecht JH, Smith RG, Timchenko NA (2007) Growth hormone corrects proliferation and transcription of pepck in livers of old mice via elimination of C/EBPα-Brm complex. J. Biol. Chem. 28, 1468–1478.
- Wang G-L, Salisbury E, Shi X, Timchenko LT, Medrano EE, Timchenko NA (2008a) HDAC1 cooperates with C/EBPα in the inhibition of liver proliferation in old mice. J. Biol. Chem. 283, 26169–26178.
- Wang G-L, Salisbury E, Shi X, Timchenko LT, Medrano EE, Timchenko NA (2008b) HDAC1 promotes liver proliferation in young mice via interaction with C/EBPα. J. Biol. Chem. 283, 26179–26187.
- Wang G-L, Shi X, Salisbury E, Timchenko NA (2008c) Regulation of apoptotic and growth inhibitory activities of C/EBPα in different cell lines. Exp. Cell Res. 314, 1626–1639.
- Wang G-L, Shi X, Haefliger S, Jin J, Major A, Iakova P, Finegold M, Timchenko NA (2010) UPS-mediated elimination of C/EBPα is required for the development of liver cancer. J. Clin. Invest. 120, 2549–2562.