Volume 56, Issue 5 pp. 1512-1521
research papers

Time-of-flight spin-echo small-angle neutron scattering applied to biological cell nuclei

Ekaterina G. Iashina

Corresponding Author

Ekaterina G. Iashina

Saint Petersburg State University, Ulyanovskaya 1, Saint Petersburg, 198504 Russian Federation

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

Ekaterina G. Iashina, e-mail: [email protected]Search for more papers by this author
Wim G. Bouwman

Wim G. Bouwman

Delft University of Technology, Mekelweg 15, Delft, 2629 JB The Netherlands

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Chris P. Duif

Chris P. Duif

Delft University of Technology, Mekelweg 15, Delft, 2629 JB The Netherlands

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Robert Dalgliesh

Robert Dalgliesh

Rutherford Appleton Laboratory, ISIS Facility, Didcot, Oxfordshire, OX11 0QX UK

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Elena Y. Varfolomeeva

Elena Y. Varfolomeeva

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

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Rimma A. Pantina

Rimma A. Pantina

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

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Roman A. Kovalev

Roman A. Kovalev

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

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Natalia D. Fedorova

Natalia D. Fedorova

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

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Sergey V. Grigoriev

Sergey V. Grigoriev

Saint Petersburg State University, Ulyanovskaya 1, Saint Petersburg, 198504 Russian Federation

Petersburg Nuclear Physics Institute, Gatchina, 188300 Russian Federation

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First published: 27 September 2023

Abstract

The organization of chromatin in the nuclei of rat lymphocyte was studied by time-of-flight spin-echo small-angle neutron scattering (ToF-SESANS). The procedures of the measurements in ToF and monochromatic SESANS modes were compared. It is shown that the sensitivity of the ToF method is significantly higher than that of the monochromatic mode. As a result, the SESANS correlation function can always be extracted from the ToF measurement of polarization, while this is not always the case with the monochromatic mode. The applicability of SESANS to fractal objects at the micrometre scale is demonstrated. The SESANS correlation function is well fitted by the exponential decay G(z) = exp(−z/ξ) with the correlation length ξ = 3.7 ± 0.1 µm. The exponential decay of the SESANS correlation function can be connected to the logarithmic correlation function γ(r) = ln(r/ξ) and the cubic law of the scattering intensity I(Q) = Q−3, which is in agreement with the concept of scattering from fractal objects. This finding is interpreted as evidence of a very specific logarithmic fractal structure of the large-scale organization of chromatin. The model of the logarithmic fractal is visualized as a hierarchical object obeying the volume-conservation principle at different scales.

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