Comprehensive Analysis of Deuterium Isotope Effects on Ionic H3O+…π Interactions Using Multi-Component Quantum Mechanics Methods
Corresponding Author
Taro Udagawa
Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Gifu, Japan
Correspondence:
Taro Udagawa ([email protected])
Yusuke Kanematsu ([email protected])
Search for more papers by this authorCorresponding Author
Yusuke Kanematsu
Smart Innovation Program, Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima, Japan
Correspondence:
Taro Udagawa ([email protected])
Yusuke Kanematsu ([email protected])
Search for more papers by this authorTakayoshi Ishimoto
Smart Innovation Program, Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima, Japan
Search for more papers by this authorMasanori Tachikawa
Graduate School of NanobioScience, Yokohama City University, Yokohama, Japan
Search for more papers by this authorCorresponding Author
Taro Udagawa
Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Gifu, Japan
Correspondence:
Taro Udagawa ([email protected])
Yusuke Kanematsu ([email protected])
Search for more papers by this authorCorresponding Author
Yusuke Kanematsu
Smart Innovation Program, Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima, Japan
Correspondence:
Taro Udagawa ([email protected])
Yusuke Kanematsu ([email protected])
Search for more papers by this authorTakayoshi Ishimoto
Smart Innovation Program, Graduate School of Advanced Science and Engineering, Hiroshima University, Hiroshima, Japan
Search for more papers by this authorMasanori Tachikawa
Graduate School of NanobioScience, Yokohama City University, Yokohama, Japan
Search for more papers by this authorFunding: This work was supported by Japan Society for the Promotion of Science, 21H00026, 21K04991, 22H02141, 23H23026, 23K17905.
ABSTRACT
Deuterium isotope effects on interaction energies and geometrical parameters in several H3O+(D3O+)…ene and H3O+(D3O+)…yne complexes, which involve O-H(D)…π interactions, have been analyzed using the MP2 level of the multi-component molecular orbital method (MC_MP2), which can incorporate the nuclear quantum effects of light nuclei, such as protons and deuterons. The MC_MP2 calculations revealed that D3O+ replacement reduced the interaction energies of the complexes and induced changes in geometrical parameters. In addition, natural energy decomposition analysis (NEDA) revealed a strong correlation between the H/D isotope effects on the H/D…π distances and on each energy component.
Open Research
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
Supporting Information
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Data S1. |
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Data S2. |
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References
- 1 G. A. Jeffery, ed., An Introduction to Hydrogen Bonding (New York: Oxford University Press, 1997).
- 2G. Gilli and P. Gilli, The Nature of the Hydrogen Bond: Outline of a Comprehensive Hydrogen Bond Theory (New York: Oxford University Press, 2009).
10.1093/acprof:oso/9780199558964.001.0001 Google Scholar
- 3M. Meot-Ner, “The Ionic Hydrogen Bond,” Chemical Reviews 105 (2005): 213–284.
- 4M. Kumar and P. V. Balaji, “C-H…Pi Interactions in Proteins: Prevalence, Pattern of Occurrence, Residue Propensities, Location, and Contribution to Protein Stability,” Journal of Molecular Modeling 20 (2014): 2136.
- 5P. Banerjee and T. Chakraborty, “Correlation of νOHSpectral Shifts of Phenol–Benzene O–H···π Hydrogen-Bonded Complexes With Donor's Acidity: A Combined Matrix Isolation, Infrared Spectroscopy, and Quantum Chemistry Study,” Journal of Physical Chemistry 118 (2014): 7074–7084.
- 6C. D. Mino, A. G. Seel, A. J. Clancy, et al., “Strong Structuring Arising From Weak Cooperative O-H···π and C-H···O Hydrogen Bonding in Benzene-Methanol Solution,” Nature Communications 14 (2023): 5900.
- 7S. Tsuzuki, K. Honda, T. Uchimaru, M. Mikami, and K. Tanabe, “Origin of the Attraction and Directionality of the NH/π Interaction: Comparison With OH/π and CH/π Interactions,” Journal of the American Chemical Society 122 (2000): 11450–11458.
- 8X. An and Q. Li, “Strong Effect of Methyl Group on the Strength of Ionic Hydrogen Bond Between C2H2and H3O+,” International Journal of Quantum Chemistry 109 (2009): 870–875.
- 9K. E. Riley, M. PitoRňák, J. Černý, and P. Hobza, “On the Structure and Geometry of Biomolecular Binding Motifs (Hydrogen-Bonding, Stacking, X−H···π): WFT and DFT Calculations,” Journal of Chemical Theory and Computation 6 (2010): 66–80.
- 10S. J. Grabowski and P. Lipkowski, “Characteristics of X-H···π Interactions: Ab Initio and QTAIM Studies,” Journal of Physical Chemistry 115 (2011): 4765–4773.
- 11J. W. G. Bloom, R. K. Raju, and S. E. Wheeler, “Physical Nature of Substituent Effects in XH/π Interactions,” Journal of Chemical Theory and Computation 8 (2012): 3167–3174.
- 12B. G. de Oliveira, “Structure, Energy, Vibrational Spectrum, and Bader's Analysis of π⋯H Hydrogen Bonds and H−δ⋯H+δdihydrogen Bonds,” Physical Chemistry Chemical Physics 15 (2013): 37–79.
- 13Q.-S. Du, Q.-Y. Wang, L.-Q. Du, D. Chen, and R.-B. Huang, “Theoretical Study on the Polar Hydrogen-π (Hp-π) Interactions Between Protein Side Chains,” Chemistry Central Journal 7 (2013): 92.
- 14Q. Wu, H. Su, H. Wang, and H. Wang, “Ab Initio Calculations, Structure, NBO and NCI Analyses of X H⋯π Interactions,” Chemical Physics Letters 693 (2018): 202–209.
- 15M. Born and R. Oppenheimer, “Zur Quantentheorie der Molekeln,” Annalen der Physik 389 (1927): 457–484.
10.1002/andp.19273892002 Google Scholar
- 16M. Tachikawa, K. Mori, H. Nakai, and K. Iguchi, “An Extension of Ab Initio Molecular Orbital Theory to Nuclear Motion,” Chemical Physics Letters 290 (1998): 437–442.
- 17T. Udagawa and M. Tachikawa, “H / D Isotope Effect on Porphine and Porphycene Molecules With Multicomponent Hybrid Density Functional Theory,” Journal of Chemical Physics 125 (2006): 244105.
- 18T. Ishimoto, M. Tachikawa, and U. Nagashima, “Review of Multicomponent Molecular Orbital Method for Direct Treatment of Nuclear Quantum Effect,” International Journal of Quantum Chemistry 109 (2009): 2677–2694.
- 19T. Udagawa, I. Hattori, Y. Kanematsu, T. Ishitmoto, and M. Tachikawa, “Nuclear Quantum Effect and H/D Isotope Effect in Excited State Intramolecular Proton Transfer and Electron-Induced Intramolecular Proton Transfer Reactions in 8-Hydroxyquinoline,” International Journal of Quantum Chemistry 122 (2022): e26962.
- 20T. Udagawa, R. B. Murphy, T. A. Darwish, M. Tachikawa, and S. Mori, “H/D Isotope Effects in Keto-Enol Tautomerism of β-Dicarbonyl Compounds —Importance of Nuclear Quantum Effects of Hydrogen Nuclei,” Bulletin of the Chemical Society of Japan 94 (2021): 1954–1962.
- 21H. Funahashi, M. Tachikawa, and T. Udagawa, “Determining if Reaction Selectivity Can be Controlled by the H/D Isotope Effect in CH···O Interactions,” Organic Letters 22 (2020): 9439–9443.
- 22Y. Itou, S. Mori, T. Udagawa, M. Tachikawa, T. Ishimoto, and U. Nagashima, “Quantum Treatment of Hydrogen Nuclei in Primary Kinetic Isotope Effects in a Thermal [1,5]-Sigmatropic Hydrogen (Or Deuterium) Shift From (Z)-1,3-Pentadiene,” Journal of Physical Chemistry. A 111 (2007): 261–267.
- 23Y. Kikuta, T. Ishimoto, and U. Nagashima, “Geometrical and Kinetic Isotope Effects on R–H(D)···R Type Intramolecular Hydrogen Bonds (R = CH2, NH, and O) Using a Multi-Component Molecular Orbital Method,” Bulletin of the Chemical Society of Japan 81 (2008): 820–825.
- 24T. Udagawa, T. Ishimoto, H. Tokiwa, M. Tachikawa, and U. Nagashima, “The Geometrical Isotope Effect of C–H⋯O Type Hydrogen Bonds Revealed by Multi-Component Molecular Orbital Calculation,” Chemical Physics Letters 389 (2004): 236–240.
- 25T. Ishimoto, M. Tachikawa, and U. Nagashima, “Analysis of Exponent Values in Gaussian-Type Functions for Development of Protonic and Deuteronic Basis Functions,” International Journal of Quantum Chemistry 106 (2006): 1465–1476.
- 26T. Isihmoto, M. Tachikawa, and U. Nagashima, “Electron-Electron and Electron-Nucleus Correlation Effects on Exponent Values of Gaussian-Type Functions for Quantum Protons and Deuterons,” Journal of Chemical Physics 125 (2006): 144103.