Volume 64, Issue 28 e202503177
Research Article

Whole-Cell Lysosome SMLM Imaging as Indicators for Functional Diagnostics with a Low-Phototoxic Spontaneously Blinking Probe

Prof. Dr. Qinglong Qiao

Corresponding Author

Prof. Dr. Qinglong Qiao

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

E-mail: [email protected], [email protected], [email protected]

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Aoxuan Song

Aoxuan Song

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

University of Chinese Academy of Sciences, Beijing, 100049 China

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Dr. Guanyu Jiang

Dr. Guanyu Jiang

Fluorescence Research Group, Singapore University of Technology and Design, Somapah Road, Tampines, 487372 Singapore

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Yuxin Zhou

Yuxin Zhou

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

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Yiyan Ruan

Yiyan Ruan

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

University of Chinese Academy of Sciences, Beijing, 100049 China

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Wenhao Jia

Wenhao Jia

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

University of Chinese Academy of Sciences, Beijing, 100049 China

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Prof. Dr. Xiaogang Liu

Corresponding Author

Prof. Dr. Xiaogang Liu

Fluorescence Research Group, Singapore University of Technology and Design, Somapah Road, Tampines, 487372 Singapore

E-mail: [email protected], [email protected], [email protected]

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Prof. Dr. Zhaochao Xu

Corresponding Author

Prof. Dr. Zhaochao Xu

Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, 116023 China

E-mail: [email protected], [email protected], [email protected]

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First published: 27 February 2025

Graphical Abstract

An NIR spontaneously blinking fluorophore, Aze-HMSiR, optimized for long-term SMLM imaging of lysosomes is developed. It exhibits superior photostability, pH responsiveness, and minimal phototoxicity. Aze-HMSiR can reveal key lysosomal characteristics, including distribution, size, and lumen pH, in response to various anticancer agents. Such whole-cell lysosome SMLM imaging serves as a valuable indicator for lysosomal functional diagnostics.

Abstract

Lysosomal morphology and pH dynamics are key indicators of lysosomal function, making long-term single-molecule localization microscopy (SMLM) imaging a promising tool for functional diagnostics. However, phototoxicity often compromises imaging reliability. Here, we develop Aze-HMSiR, a spontaneously blinking silicon rhodamine probe with near-infrared excitation, enabling low-phototoxicity, long-term (50 min) SMLM imaging of lysosomal morphology and pH dynamics. This probe provides super-resolution insights into lysosomal distribution, size, and lumen pH, essential for understanding their physiological and pathological roles. Using Aze-HMSiR, we investigate lysosomal function under acidosis, starvation, and anticancer drug treatments. Among seven tested drugs, periplocoside significantly reduced lysosomal size, while paclitaxel increased pH and altered lysosomal distribution. These findings highlight Aze-HMSiR as a powerful tool for lysosomal functional diagnostics and drug screening, offering a robust platform for studying lysosomal dynamics in response to physiological and pharmacological perturbations, particularly in cancer therapy.

Conflict of Interests

The authors declare no conflict of interest.

Data Availability Statement

The data that support the findings of this study are available from the corresponding author upon reasonable request.

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