Table of Contents

CHAPTER 1
Open Computing Grid for Molecular Sciences (Pages: 1-21)
Mathilde Romberg Emilio Benfenati Werner Dubitzky
CHAPTER 3
Optimized Cluster-Enabled HMMER Searches (Pages: 51-70)
John Paul Walters Joseph Landman Vipin Chaudhary
CHAPTER 8
Molecular Docking Using Grid Computing (Pages: 179-198)
Alexandru-Adrian Tantar Nouredine Melab El-Ghazali Talbi
CHAPTER 9
Deployment of Grid Life Sciences Applications (Pages: 199-223)
Vincent Breton Nicolas Jacq Vinod Kasam Jean Salzemann
CHAPTER 10
Grid-Based Interactive Decision Support in Biomedicine (Pages: 225-246)
Alfredo Tirado-Ramos Peter M. A. Sloot Marian Bubak
CHAPTER 11
Database-Driven Grid Computing and Distributed Web Applications: A Comparison (Pages: 247-266)
Hans De Sterck Aleks Papo Chen Zhang Micah Hamady Rob Knight
CHAPTER 12
A Semantic Mediation Architecture for a Clinical Data Grid (Pages: 267-299)
Kai Kumpf Alexander Wöhrer Siegfried Benkner G. Engelbrecht Jochen Fingberg
CHAPTER 13
Bioinformatics Applications in Grid Computing Environments (Pages: 301-323)
Azzedine Boukerche Alba Cristina Magalhaes Alves de Melo
CHAPTER 14
Recent Advances in Solving the Protein Threading Problem (Pages: 325-356)
Rumen Andonov Guillaume Collet J.-F. Gibrat A. Marin Vincent Poirriez N. Yanev
CHAPTER 15
DNA Fragment Assembly Using Grid Systems (Pages: 357-374)
Antonio J. Nebro Gabriel Luque Enrique Alba
CHAPTER 16
Seeing Is Knowing: Visualization of Parameter–Parameter Dependencies in Biomedical Network Models (Pages: 375-387)
Akihiki Konagaya Ryuzo Azuma Ryo Umetsu Shingo Ohki Fumikazu Konishi Kazum Matsumura Sumi Yoshikawa