Volume 78, Issue 8 pp. 997-1009
research papers

Data collection from crystals grown in microfluidic droplets

Gyorgy Babnigg

Corresponding Author

Gyorgy Babnigg

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

Gyorgy Babnigg, e-mail: [email protected]; Andrzej Joachimiak, e-mail: [email protected]Search for more papers by this author
Darren Sherrell

Darren Sherrell

Argonne National Laboratory, Structural Biology Center, X-ray Science Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Youngchang Kim

Youngchang Kim

Argonne National Laboratory, Structural Biology Center, X-ray Science Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Jessica L. Johnson

Jessica L. Johnson

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Boguslaw Nocek

Boguslaw Nocek

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Kemin Tan

Kemin Tan

Argonne National Laboratory, Structural Biology Center, X-ray Science Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Danny Axford

Danny Axford

Diamond Light Source, Harwell Science and Innovation Campus, Fermi Avenue, Didcot, OX11 0DE United Kingdom

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Hui Li

Hui Li

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Lance Bigelow

Lance Bigelow

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Lukas Welk

Lukas Welk

Argonne National Laboratory, Biosciences Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Michael Endres

Michael Endres

Argonne National Laboratory, Structural Biology Center, X-ray Science Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

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Robin L. Owen

Robin L. Owen

Diamond Light Source, Harwell Science and Innovation Campus, Fermi Avenue, Didcot, OX11 0DE United Kingdom

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Andrzej Joachimiak

Corresponding Author

Andrzej Joachimiak

Argonne National Laboratory, Structural Biology Center, X-ray Science Division, 9700 South Cass Avenue, Lemont, IL, 60439 USA

University of Chicago, Department of Biochemistry and Molecular Biology, Chicago, IL, 60367 USA

Gyorgy Babnigg, e-mail: [email protected]; Andrzej Joachimiak, e-mail: [email protected]Search for more papers by this author
First published: 21 July 2022

Abstract

Protein crystals grown in microfluidic droplets have been shown to be an effective and robust platform for storage, transport and serial crystallography data collection with a minimal impact on diffraction quality. Single macromolecular microcrystals grown in nanolitre-sized droplets allow the very efficient use of protein samples and can produce large quantities of high-quality samples for data collection. However, there are challenges not only in growing crystals in microfluidic droplets, but also in delivering the droplets into X-ray beams, including the physical arrangement, beamline and timing constraints and ease of use. Here, the crystallization of two human gut microbial hydrolases in microfluidic droplets is described: a sample-transport and data-collection approach that is inexpensive, is convenient, requires small amounts of protein and is forgiving. It is shown that crystals can be grown in 50–500 pl droplets when the crystallization conditions are compatible with the droplet environment. Local and remote data-collection methods are described and it is shown that crystals grown in microfluidics droplets and housed as an emulsion in an Eppendorf tube can be shipped from the US to the UK using a FedEx envelope, and data can be collected successfully. Details of how crystals were delivered to the X-ray beam by depositing an emulsion of droplets onto a silicon fixed-target serial device are provided. After three months of storage at 4°C, the crystals endured and diffracted well, showing only a slight decrease in diffracting power, demonstrating a suitable way to grow crystals, and to store and collect the droplets with crystals for data collection. This sample-delivery and data-collection strategy allows crystal droplets to be shipped and set aside until beamtime is available.

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