• Issue

    Acta Crystallographica Section F: Volume 66, Issue 10

    1137-1405
    October 2010
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JCSG pipeline: technology and dissemination

Open Access

The JCSG high-throughput structural biology pipeline

Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  John Wooley,  Kurt Wüthrich,  Ian A. Wilson, 
  • Pages: 1137-1142
  • First Published: 18 October 2010
Open Access

TOPSAN: use of a collaborative environment for annotating, analyzing and disseminating data on JCSG and PSI structures

S. Sri Krishna,  Dana Weekes,  Constantina Bakolitsa,  Marc-André Elsliger,  Ian A. Wilson,  Adam Godzik,  John Wooley, 
  • Pages: 1143-1147
  • First Published: 18 October 2010

domains of unknown function

Open Access

DUFs: families in search of function

Alex Bateman,  Penny Coggill,  Robert D. Finn, 
  • Pages: 1148-1152
  • First Published: 18 October 2010
Open Access

Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism

Hsiu-Ju Chiu,  Constantina Bakolitsa,  Arne Skerra,  Andrei Lomize,  Dennis Carlton,  Mitchell D. Miller,  S. Sri Krishna,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Slawomir K. Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1153-1159
  • First Published: 18 October 2010
Open Access

The structure of SSO2064, the first representative of Pfam family PF01796, reveals a novel two-domain zinc-ribbon OB-fold architecture with a potential acyl-CoA-binding role

S. Sri Krishna,  L. Aravind,  Constantina Bakolitsa,  Jonathan Caruthers,  Dennis Carlton,  Mitchell D. Miller,  Polat Abdubek,  Tamara Astakhova,  Herbert L Axelrod,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Christopher L. Rife,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1160-1166
  • First Published: 18 October 2010
Open Access

Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation

Mitchell D. Miller,  L. Aravind,  Constantina Bakolitsa,  Christopher L. Rife,  Dennis Carlton,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1167-1173
  • First Published: 18 October 2010
Open Access

The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation

Debanu Das,  Nick V. Grishin,  Abhinav Kumar,  Dennis Carlton,  Constantina Bakolitsa,  Mitchell D. Miller,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Prasad Burra,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Dustin Ernst,  Carol L. Farr,  Julie Feuerhelm,  Anna Grzechnik,  Slawomir K. Grzechnik,  Joanna C. Grant,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Hope A. Johnson,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Christina Puckett,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1174-1181
  • First Published: 18 October 2010
Open Access

Structures of the first representatives of Pfam family PF06684 (DUF1185) reveal a novel variant of the Bacillus chorismate mutase fold and suggest a role in amino-acid metabolism

Constantina Bakolitsa,  Abhinav Kumar,  Kevin K. Jin,  Daniel McMullan,  S. Sri Krishna,  Mitchell D. Miller,  Polat Abdubek,  Claire Acosta,  Tamara Astakhova,  Herbert L. Axelrod,  Prasad Burra,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Ylva Elias,  Kyle Ellrott,  Dustin Ernst,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Slawomir K. Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Hope A. Johnson,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  David Marciano,  Andrew T. Morse,  Kevin D. Murphy,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Jessica Paulsen,  Christina Puckett,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Christina V. Trout,  Henry Van Den Bedem,  Dana Weekes,  Aprilfawn White,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-Andre Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1182-1189
  • First Published: 18 October 2010

new folds

Open Access

Structural classification of proteins and structural genomics: new insights into protein folding and evolution

Antonina Andreeva,  Alexey G. Murzin, 
  • Pages: 1190-1197
  • First Published: 18 October 2010
Open Access

The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45 Å resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator

Constantina Bakolitsa,  Alex Bateman,  Kevin K. Jin,  Daniel McMullan,  S. Sri Krishna,  Mitchell D. Miller,  Polat Abdubek,  Claire Acosta,  Tamara Astakhova,  Herbert L. Axelrod,  Prasad Burra,  Dennis Carlton,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Ylva Elias,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Slawomir K. Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  Abhinav Kumar,  David Marciano,  Andrew T. Morse,  Kevin D. Murphy,  Edward Nigoghossian,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry Tien,  Christine B. Trame,  Christina V. Trout,  Henry Van Den Bedem,  Dana Weekes,  Aprilfawn White,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott Lesley,  Ian A. Wilson, 
  • Pages: 1198-1204
  • First Published: 18 October 2010
Open Access

Structure of LP2179, the first representative of Pfam family PF08866, suggests a new fold with a role in amino-acid metabolism

Constantina Bakolitsa,  Abhinav Kumar,  Dennis Carlton,  Mitchell D. Miller,  S. Sri Krishna,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Marc-André Elsliger,  Julie Feuerhelm,  Slawomir K. Grzechnik,  Joanna C. Grant,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Henry J. Tien,  Christina V. Trout,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1205-1210
  • First Published: 18 October 2010
Open Access

The structure of the first representative of Pfam family PF06475 reveals a new fold with possible involvement in glycolipid metabolism

Constantina Bakolitsa,  Abhinav Kumar,  Daniel McMullan,  S. Sri Krishna,  Mitchell D. Miller,  Dennis Carlton,  Rafael Najmanovich,  Polat Abdubek,  Tamara Astakhova,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Ylva Elias,  Julie Feuerhelm,  Joanna C. Grant,  Slawomir K. Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  David Marciano,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Christina V. Trout,  Henry Van Den Bedem,  Dana Weekes,  Aprilfawn White,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1211-1217
  • First Published: 18 October 2010
Open Access

Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction

Gye Won Han,  Constantina Bakolitsa,  Mitchell D. Miller,  Abhinav Kumar,  Dennis Carlton,  Rafael J. Najmanovich,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Dustin Ernst,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Lukasz Jaroszewski,  Kevin K. Jin,  Hope A. Johnson,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1218-1225
  • First Published: 18 October 2010

novel variants of known folds and function

Open Access

New variants of known folds: do they bring new biology?

Eugene V. Koonin, 
  • Pages: 1226-1229
  • First Published: 18 October 2010
Open Access

Structure of an essential bacterial protein YeaZ (TM0874) from Thermotoga maritima at 2.5 Å resolution

Qingping Xu,  Daniel McMullan,  Lukasz Jaroszewski,  S. Sri Krishna,  Marc-André Elsliger,  Andrew P. Yeh,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Dennis Carlton,  Hsiu-Ju Chiu,  Thomas Clayton,  Lian Duan,  Julie Feuerhelm,  Joanna Grant,  Gye Won Han,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Henry Van Den Bedem,  Keith O. Hodgson,  John Wooley,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1230-1236
  • First Published: 18 October 2010
Open Access

Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15

Gye Won Han,  Marc-André Elsliger,  Todd O. Yeates,  Qingping Xu,  Alexey G. Murzin,  S. Sri Krishna,  Lukasz Jaroszewski,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Dustin Ernst,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Kevin K. Jin,  Hope A. Johnson,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Keith O. Hodgson,  John Wooley,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1237-1244
  • First Published: 18 October 2010
Open Access

Open and closed conformations of two SpoIIAA-like proteins (YP_749275.1 and YP_001095227.1) provide insights into membrane association and ligand binding

Abhinav Kumar,  Andrei Lomize,  Kevin K. Jin,  Dennis Carlton,  Mitchell D. Miller,  Lukasz Jaroszewski,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1245-1253
  • First Published: 18 October 2010
Open Access

The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold

Debanu Das,  Piotr Kozbial,  Gye Won Han,  Dennis Carlton,  Lukasz Jaroszewski,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Marc-André Elsliger,  Dustin Ernst,  Carol L. Farr,  Julie Feuerhelm,  Anna Grzechnik,  Joanna C. Grant,  Kevin K. Jin,  Hope A. Johnson,  Heath E. Klock,  Mark W. Knuth,  S. Sri Krishna,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Christina Puckett,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1254-1260
  • First Published: 18 October 2010

human gut microbiome

Open Access

Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes

Peter J. Turnbaugh,  Bernard Henrissat,  Jeffrey I. Gordon, 
  • Pages: 1261-1264
  • First Published: 18 October 2010
Open Access

The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function

Debanu Das,  Robert D. Finn,  Dennis Carlton,  Mitchell D. Miller,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Dustin Ernst,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Christopher L. Rife,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1265-1273
  • First Published: 18 October 2010
Open Access

Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules

Constantina Bakolitsa,  Qingping Xu,  Christopher L. Rife,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1274-1280
  • First Published: 18 October 2010
Open Access

A conserved fold for fimbrial components revealed by the crystal structure of a putative fimbrial assembly protein (BT1062) from Bacteroides thetaiotaomicron at 2.2 Å resolution

Qingping Xu,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Xiaohui Cai,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Andrew Yeh,  Jiadong Zhou,  Keith O. Hodgson,  John Wooley,  Marc-Andre Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1281-1286
  • First Published: 18 October 2010
Open Access

Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 Å resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism

Andrew P. Yeh,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Xiaohui Cai,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1287-1296
  • First Published: 18 October 2010
Open Access

Structure of a membrane-attack complex/perforin (MACPF) family protein from the human gut symbiont Bacteroides thetaiotaomicron

Qingping Xu,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Xiaohui Cai,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Andrew Yeh,  Jiadong Zhou,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1297-1305
  • First Published: 18 October 2010

ligands that aid in function characterization

Open Access

Ligands in crystal structures that aid in functional characterization

Anna E. Speers,  Benjamin F. Cravatt, 
  • Pages: 1306-1308
  • First Published: 18 October 2010
Open Access

Ligands in PSI structures

Abhinav Kumar,  Hsiu-Ju Chiu,  Herbert L. Axelrod,  Andrew Morse,  Marc-André Elsliger,  Ian A. Wilson,  Ashley Deacon, 
  • Pages: 1309-1316
  • First Published: 18 October 2010
Open Access

The structure of Haemophilus influenzae prephenate dehydrogenase suggests unique features of bifunctional TyrA enzymes

Hsiu-Ju Chiu,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Dennis Carlton,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Ron Reyes,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1317-1325
  • First Published: 18 October 2010
Open Access

Structure of a tryptophanyl-tRNA synthetase containing an iron–sulfur cluster

Gye Won Han,  Xiang-Lei Yang,  Daniel McMullan,  Yeeting E. Chong,  S. Sri Krishna,  Christopher L. Rife,  Dana Weekes,  Scott M. Brittain,  Polat Abdubek,  Eileen Ambing,  Tamara Astakhova,  Herbert L. Axelrod,  Dennis Carlton,  Jonathan Caruthers,  Hsiu-Ju Chiu,  Thomas Clayton,  Lian Duan,  Julie Feuerhelm,  Joanna C. Grant,  Slawomir K. Grzechnik,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Abhinav Kumar,  David Marciano,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Linda Okach,  Jessica Paulsen,  Ron Reyes,  Henry Van Den Bedem,  Aprilfawn White,  Guenter Wolf,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Marc-André Elsliger,  Paul Schimmel,  Ian A. Wilson, 
  • Pages: 1326-1334
  • First Published: 18 October 2010
Open Access

Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger

Herbert L. Axelrod,  Debanu Das,  Polat Abdubek,  Tamara Astakhova,  Constantina Bakolitsa,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Daniel McMullan,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Natasha Sefcovic,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Qingping Xu,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1335-1346
  • First Published: 18 October 2010
Open Access

Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris

Herbert L. Axelrod,  Piotr Kozbial,  Daniel McMullan,  S. Sri Krishna,  Mitchell D. Miller,  Polat Abdubek,  Claire Acosta,  Tamara Astakhova,  Dennis Carlton,  Jonathan Caruthers,  Hsiu-Ju Chiu,  Thomas Clayton,  Marc C. Deller,  Lian Duan,  Ylva Elias,  Julie Feuerhelm,  Slawomir K. Grzechnik,  Joanna C. Grant,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Abhinav Kumar,  David Marciano,  Andrew T. Morse,  Kevin D. Murphy,  Edward Nigoghossian,  Linda Okach,  Silvya Oommachen,  Jessica Paulsen,  Ron Reyes,  Christopher L. Rife,  Henry J. Tien,  Christina V. Trout,  Henry Van Den Bedem,  Dana Weekes,  Aprilfawn White,  Qingping Xu,  Chloe Zubieta,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1347-1353
  • First Published: 18 October 2010
Open Access

Structure of the γ-d-glutamyl-l-diamino acid endopeptidase YkfC from Bacillus cereus in complex with l-Ala-γ-d-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases

Qingping Xu,  Polat Abdubek,  Tamara Astakhova,  Herbert L. Axelrod,  Constantina Bakolitsa,  Xiaohui Cai,  Dennis Carlton,  Connie Chen,  Hsiu-Ju Chiu,  Michelle Chiu,  Thomas Clayton,  Debanu Das,  Marc C. Deller,  Lian Duan,  Kyle Ellrott,  Carol L. Farr,  Julie Feuerhelm,  Joanna C. Grant,  Anna Grzechnik,  Gye Won Han,  Lukasz Jaroszewski,  Kevin K. Jin,  Heath E. Klock,  Mark W. Knuth,  Piotr Kozbial,  S. Sri Krishna,  Abhinav Kumar,  Winnie W. Lam,  David Marciano,  Mitchell D. Miller,  Andrew T. Morse,  Edward Nigoghossian,  Amanda Nopakun,  Linda Okach,  Christina Puckett,  Ron Reyes,  Henry J. Tien,  Christine B. Trame,  Henry Van Den Bedem,  Dana Weekes,  Tiffany Wooten,  Andrew Yeh,  Keith O. Hodgson,  John Wooley,  Marc-André Elsliger,  Ashley M. Deacon,  Adam Godzik,  Scott A. Lesley,  Ian A. Wilson, 
  • Pages: 1354-1364
  • First Published: 18 October 2010

NMR in a high-throughput environment

Open Access

NMR in a crystallography-based high-throughput protein structure-determination environment

Kurt Wüthrich, 
  • Pages: 1365-1366
  • First Published: 18 October 2010
Open Access

NMR structure of the protein NP_247299.1: comparison with the crystal structure

Kristaps Jaudzems,  Michael Geralt,  Pedro Serrano,  Biswaranjan Mohanty,  Reto Horst,  Bill Pedrini,  Marc-André Elsliger,  Ian A. Wilson,  Kurt Wüthrich, 
  • Pages: 1367-1380
  • First Published: 18 October 2010
Open Access

Comparison of NMR and crystal structures for the proteins TM1112 and TM1367

Biswaranjan Mohanty,  Pedro Serrano,  Bill Pedrini,  Kristaps Jaudzems,  Michael Geralt,  Reto Horst,  Torsten Herrmann,  Marc-André Elsliger,  Ian A. Wilson,  Kurt Wüthrich, 
  • Pages: 1381-1392
  • First Published: 18 October 2010
Open Access

Comparison of NMR and crystal structures highlights conformational isomerism in protein active sites

Pedro Serrano,  Bill Pedrini,  Michael Geralt,  Kristaps Jaudzems,  Biswaranjan Mohanty,  Reto Horst,  Torsten Herrmann,  Marc-André Elsliger,  Ian A. Wilson,  Kurt Wüthrich, 
  • Pages: 1393-1405
  • First Published: 18 October 2010