• Issue

    Acta Crystallographica Section D: Volume 60, Issue 12-1

    0-2294
    December 2004
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issue preface

Open Access

Model building and refinement

Martin Noble,  Anastassis Perrakis, 
  • Page: 0
  • First Published: 03 December 2004

research papers

Open Access

Interactive electron-density map interpretation: from INTER to O

T. Alwyn Jones, 
  • Pages: 2115-2125
  • First Published: 03 December 2004
Open Access

Coot: model-building tools for molecular graphics

Paul Emsley,  Kevin Cowtan, 
  • Pages: 2126-2132
  • First Published: 03 December 2004
Open Access

Statistical pattern recognition for macromolecular crystallographers

Richard J. Morris, 
  • Pages: 2133-2143
  • First Published: 03 December 2004
Open Access

Using prime-and-switch phasing to reduce model bias in molecular replacement

Thomas C. Terwilliger, 
  • Pages: 2144-2149
  • First Published: 03 December 2004
Open Access

Practical aspects of the integration of different software in protein structure solution

Vito Calderone, 
  • Pages: 2150-2155
  • First Published: 03 December 2004
Open Access

Introduction to macromolecular refinement

Dale. E. Tronrud, 
  • Pages: 2156-2168
  • First Published: 03 December 2004
Open Access

Liking likelihood

Airlie J. McCoy, 
  • Pages: 2169-2183
  • First Published: 03 December 2004
Open Access

REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its use

Alexei A. Vagin,  Roberto A. Steiner,  Andrey A. Lebedev,  Liz Potterton,  Stuart McNicholas,  Fei Long,  Garib N. Murshudov, 
  • Pages: 2184-2195
  • First Published: 03 December 2004
Open Access

Direct incorporation of experimental phase information in model refinement

Pavol Skubák,  Garib N. Murshudov,  Navraj S. Pannu, 
  • Pages: 2196-2201
  • First Published: 03 December 2004
Open Access

The potentials of conditional optimization in phasing and model building of protein crystal structures

Sjors H. W. Scheres,  Piet Gros, 
  • Pages: 2202-2209
  • First Published: 03 December 2004
Open Access

Refinement of severely incomplete structures with maximum likelihood in BUSTER–TNT

E. Blanc,  P. Roversi,  C. Vonrhein,  C. Flensburg,  S. M. Lea,  G. Bricogne, 
  • Pages: 2210-2221
  • First Published: 03 December 2004
Open Access

Towards complete validated models in the next generation of ARP/wARP

Serge X. Cohen,  Richard J. Morris,  Francisco J. Fernandez,  Marouane Ben Jelloul,  Mattheos Kakaris,  Venkataraman Parthasarathy,  Victor S. Lamzin,  Gerard J. Kleywegt,  Anastassis Perrakis, 
  • Pages: 2222-2229
  • First Published: 03 December 2004
Open Access

Modelling bound ligands in protein crystal structures

P. H. Zwart,  G. G. Langer,  V. S. Lamzin, 
  • Pages: 2230-2239
  • First Published: 03 December 2004
Open Access

The Uppsala Electron-Density Server

Gerard J. Kleywegt,  Mark R. Harris,  Jin-yu Zou,  Thomas C. Taylor,  Anders Wählby,  T. Alwyn Jones, 
  • Pages: 2240-2249
  • First Published: 03 December 2004
Open Access

The new CCP4 Coordinate Library as a toolkit for the design of coordinate-related applications in protein crystallography

E. B. Krissinel,  M. D. Winn,  C. C. Ballard,  A. W. Ashton,  P. Patel,  E. A. Potterton,  S. J. McNicholas,  K. D. Cowtan,  P. Emsley, 
  • Pages: 2250-2255
  • First Published: 03 December 2004
Open Access

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

E. Krissinel,  K. Henrick, 
  • Pages: 2256-2268
  • First Published: 03 December 2004
Open Access

Domain identification by iterative analysis of error-scaled difference distance matrices

Thomas R. Schneider, 
  • Pages: 2269-2275
  • First Published: 03 December 2004
Open Access

Differential evolution for protein crystallographic optimizations

Duncan E. McRee, 
  • Pages: 2276-2279
  • First Published: 03 December 2004
Open Access

Dynamite: a simple way to gain insight into protein motions

C. Paul Barrett,  Benjamin A. Hall,  Martin E. M. Noble, 
  • Pages: 2280-2287
  • First Published: 03 December 2004
Open Access

Developments in the CCP4 molecular-graphics project

Liz Potterton,  Stuart McNicholas,  Eugene Krissinel,  Jan Gruber,  Kevin Cowtan,  Paul Emsley,  Garib N. Murshudov,  Serge Cohen,  Anastassis Perrakis,  Martin Noble, 
  • Pages: 2288-2294
  • First Published: 03 December 2004