• Issue

    Proteins: Structure, Function, and Bioinformatics: Volume 84, Issue 10

    C1, 1337-1564, C4
    October 2016
Previous Issue|Next Issue
Export Citation(s)Download PDF(s)

Cover Image

Free Access

Cover Image, Volume 84, Issue 10

Carter T. Butts,  Jan C. Bierma,  Rachel W. Martin, 
  • Page: C1
  • First Published: 16 September 2016
Cover Image, Volume 84, Issue 10

The cover image, by Rachel W. Martin et al., is based on the Article Novel proteases from the genome of the carnivorous plant Drosera capensis: structural prediction and comparative analysis, DOI: 10.1002/prot.25095.

Table of Content

Free Access

Issue Information - Table of Content

  • Page: 1337
  • First Published: 16 September 2016

Articles

Mutation design of a thermophilic Rubisco based on three-dimensional structure enhances its activity at ambient temperature

Masahiro Fujihashi,  Yuichi Nishitani,  Tomohiro Kiriyama,  Riku Aono,  Takaaki Sato,  Tomoyuki Takai,  Kenta Tagashira,  Wakao Fukuda,  Haruyuki Atomi,  Tadayuki Imanaka,  Kunio Miki, 
  • Pages: 1339-1346
  • First Published: 06 June 2016

Dowser++, a new method of hydrating protein structures

A. Morozenko,  A. A. Stuchebrukhov, 
  • Pages: 1347-1357
  • First Published: 06 June 2016

Artificial proteins as allosteric modulators of PDZ3 and SH3 in two-domain constructs: A computational characterization of novel chimeric proteins

Palani Kirubakaran,  Lucie Pfeiferová,  Kristýna Boušová,  Lucie Bednarova,  Veronika Obšilová,  Jiří Vondrášek, 
  • Pages: 1358-1374
  • First Published: 06 June 2016

Structural characterization of the heme-based oxygen sensor, AfGcHK, its interactions with the cognate response regulator, and their combined mechanism of action in a bacterial two-component signaling system

Martin Stranava,  Václav Martínek,  Petr Man,  Veronika Fojtikova,  Daniel Kavan,  Ondřej Vaněk,  Toru Shimizu,  Marketa Martinkova, 
  • Pages: 1375-1389
  • First Published: 07 June 2016

BiPPred: Combined sequence- and structure-based prediction of peptide binding to the Hsp70 chaperone BiP

Markus Schneider,  Mathias Rosam,  Manuel Glaser,  Atanas Patronov,  Harpreet Shah,  Katrin Christiane Back,  Marina Angelika Daake,  Johannes Buchner,  Iris Antes, 
  • Pages: 1390-1407
  • First Published: 10 June 2016
Open Access

Great interactions: How binding incorrect partners can teach us about protein recognition and function

Lydie Vamparys,  Benoist Laurent,  Alessandra Carbone,  Sophie Sacquin-Mora, 
  • Pages: 1408-1421
  • First Published: 10 June 2016

Characterization of the structure and catalytic activity of Legionella pneumophila VipF

Byron H. Young,  Tracy A. Caldwell,  Aidan M. McKenzie,  Oleksandr Kokhan,  Christopher E. Berndsen, 
  • Pages: 1422-1430
  • First Published: 17 June 2016
Open Access

Potential DNA binding and nuclease functions of ComEC domains characterized in silico

James A. Baker,  Felix Simkovic,  Helen M.C. Taylor,  Daniel J. Rigden, 
  • Pages: 1431-1442
  • First Published: 18 June 2016

Reactivation of mutant p53: Constraints on mechanism highlighted by principal component analysis of the DNA binding domain

Zahra Ouaray,  Karim M. ElSawy,  David P. Lane,  Jonathan W. Essex,  Chandra Verma, 
  • Pages: 1443-1461
  • First Published: 18 June 2016

The part of a long beta hairpin from the scrapie form of the human prion protein is reconstructed in the synthetic CC36 protein

Vladislav Victorovich Khrustalev,  Tatyana Aleksandrovna Khrustaleva,  Kamil Szpotkowski,  Victor Vitoldovich Poboinev,  Katsiaryna Yurieuna Kakhanouskaya, 
  • Pages: 1462-1479
  • First Published: 18 June 2016

Accelerated molecular dynamics simulations of the octopamine receptor using GPUs: discovery of an alternate agonist-binding position

Kevin W. Kastner,  Jesús A. Izaguirre, 
  • Pages: 1480-1489
  • First Published: 18 June 2016
Open Access

FF12MC: A revised AMBER forcefield and new protein simulation protocol

Yuan-Ping Pang, 
  • Pages: 1490-1516
  • First Published: 27 June 2016

Novel proteases from the genome of the carnivorous plant Drosera capensis: Structural prediction and comparative analysis

Carter T. Butts,  Jan C. Bierma,  Rachel W. Martin, 
  • Pages: 1517-1533
  • First Published: 29 June 2016

Computational exploration of the binding mode of heme-dependent stimulators into the active catalytic domain of soluble guanylate cyclase

Luis Agulló,  Ignasi Buch,  Hugo Gutiérrez-de-Terán,  David Garcia-Dorado,  Jordi Villà-Freixa, 
  • Pages: 1534-1548
  • First Published: 01 July 2016

THz frequency spectrum of protein–solvent interaction energy using a recurrence plot-based Wiener–Khinchin method

Wael Karain, 
  • Pages: 1549-1557
  • First Published: 30 June 2016

Structure Note

Crystal structure of the N-terminal domain of human SIRT7 reveals a three-helical domain architecture

Anu Priyanka,  Vipul Solanki,  Raman Parkesh,  Krishan Gopal Thakur, 
  • Pages: 1558-1563
  • First Published: 10 June 2016

Issue Information - Forthcoming

Free Access

Issue Information - Forthcoming

  • Page: 1564
  • First Published: 16 September 2016

Issue Information - Cover Image

Free Access

Cover Image, Volume 84, Issue 10

Yuan-Ping Pang, 
  • Page: C4
  • First Published: 16 September 2016
Cover Image, Volume 84, Issue 10

The cover image, by Yuan-Ping Pang., is based on the FF12MC: A revised AMBER forcefield and new protein simulation protocol, DOI: 10.1002/prot.25094.