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  Proteins: Structure, Function, and Bioinformatics: Volume 48, Issue 4

  Pages: 593-740

  1 September 2002

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Research Articles

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Completion and refinement of 3-D homology models with restricted molecular dynamics: Application to targets 47, 58, and 111 in the CASP modeling competition and posterior analysis

J.A. Flohil,  G. Vriend,  H.J.C. Berendsen, 

• Pages: 593-604
• First Published: 26 June 2002

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no

Optimization of a new score function for the generation of accurate alignments

Bin Qian,  Richard A. Goldstein, 

• Pages: 605-610
• First Published: 26 June 2002

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no

Mapping pathways of allosteric communication in GroEL by analysis of correlated mutations

Itamar Kass,  Amnon Horovitz, 

• Pages: 611-617
• First Published: 12 July 2002

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no

1.3-Å resolution structure of human glutathione S-transferase with S-hexyl glutathione bound reveals possible extended ligandin binding site

Isolde Le Trong,  Ronald E. Stenkamp,  Catherine Ibarra,  William M. Atkins,  Elinor T. Adman, 

• Pages: 618-627
• First Published: 12 July 2002

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no

Aromatic side-chain interactions in proteins. I. Main structural features

Annick Thomas,  Rita Meurisse,  Benoit Charloteaux,  Robert Brasseur, 

• Pages: 628-634
• First Published: 08 July 2002

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no

Aromatic side-chain interactions in proteins. II. Near- and far-sequence Phe-X pairs

Annick Thomas,  Rita Meurisse,  Robert Brasseur, 

• Pages: 635-644
• First Published: 12 July 2002

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no

Stability of macromolecular complexes

Natasja Brooijmans,  Kim A. Sharp,  Irwin D. Kuntz, 

• Pages: 645-653
• First Published: 12 July 2002

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no

Triage protein fold prediction

Hongxian He,  Gregory McAllister,  Temple F. Smith, 

• Pages: 654-663
• First Published: 08 July 2002

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no

Progress toward virtual screening for drug side effects

William M. Rockey,  Adrian H. Elcock, 

• Pages: 664-671
• First Published: 30 July 2002

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Protein domain identification and improved sequence similarity searching using PSI-BLAST

Richard A. George,  Jaap Heringa, 

• Pages: 672-681
• First Published: 12 July 2002

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Normal mode analysis of macromolecular motions in a database framework: Developing mode concentration as a useful classifying statistic

W. G. Krebs,  Vadim Alexandrov,  Cyrus A. Wilson,  Nathaniel Echols,  Haiyuan Yu,  Mark Gerstein, 

• Pages: 682-695
• First Published: 30 July 2002

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Research Articles

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MIAX: A new paradigm for modeling biomacromolecular interactions and complex formation in condensed phases

Carlos Adriel Del Carpio-Muñoz,  Eiichiro Ichiishi,  Atsushi Yoshimori,  Toshikazu Yoshikawa, 

• Pages: 696-732
• First Published: 31 July 2002

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Structure Notes

Free Access

free

NMR structure of conserved eukaryotic protein ZK652.3 from C. elegans: A ubiquitin-like fold

John R. Cort,  Yiwen Chiang,  Deyou Zheng,  Gaetano T. Montelione,  Michael A. Kennedy, 

• Pages: 733-736
• First Published: 30 July 2002

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Free Access

free

Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli

Erumbi S. Rangarajan,  J. Sivaraman,  Allan Matte,  Miroslaw Cygler, 

• Pages: 737-740
• First Published: 30 July 2002

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