Beta-thalassaemia intermedia: is it possible consistently to predict phenotype from genotype?
Ho
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorHall
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Department of Haematology, Royal Free Hospital, London
Search for more papers by this authorLuo
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorWeatherall
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorThein
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorHo
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorHall
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Department of Haematology, Royal Free Hospital, London
Search for more papers by this authorLuo
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorWeatherall
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorThein
MRC Molecular Haematology Unit, Institute of Molecular Medicine, Oxford,
Search for more papers by this authorAbstract
Eighty-seven patients with β thalassaemia of intermediate severity were investigated in our Unit to determine whether it is possible to consistently predict phenotypic severity from genotypic factors. The subjects were from the following ethnic backgrounds: Asian Indian (35.1%), Middle Eastern (24.3%), Mediterranean (21.6%), Northern European (14.9%) and South-East Asian/Chinese (4.1%). There was a wide spectrum of phenotypic severity; 49 had mild disease, 22 moderate and 16 severe disease. 22/87 patients had inherited only a single copy of a β-thalassaemia allele, of whom 11 had also co-inherited triplicated α genes (ααα/αα or ααα/ααα) and seven had dominantly inherited β thalassaemia. In four of the heterozygotes no explanation was found for the thalassaemia-intermedia phenotype. 65/87 patients were homozygous or compound heterozygous for 26 mutations (40 genotypes) which ranged from very mild β+ to β° thalassaemia alleles. All patients with two mild or very mild β+ thalassaemia alleles had mild to moderate disease. Although concurrent inheritance of extra α genes with heterozygous β thalassaemia results in thalassaemia intermedia, the disease is mild. Co-inheritance of α thalassaemia as a modulating factor was not evident in this cohort of patients. Presence of the in-cis Xmn I-Gγ site was a modulating factor but insufficient to explain the high fetal haemoglobin levels encountered. In conclusion, apart from the two categories of triplicated α genes with heterozygous β thalassaemia and inheritance of mild β+ thalassaemia alleles, it was not possible to consistently predict phenotype from α and β genotypes alone, due to the influence of modulating factors, some implicated (such as inheritance of HPFH determinants) and others as yet unidentified.
References
- 1 Baklouti, F., Dorleac, E., Morle, L., Laselve, P., Peyramond, D., Aubry, M., Godet, J., Delaunay, J. (1986) Homozygous hemoglobin Knossos (α2β227 (B9) Ala→Ser): a new variety of β+ thalassemia intermedia associated with δ° thalassemia. Blood, 67, 957 961.
- 2 Baysal, E. & Carver, M.F.H. (1995) The β- and δ-thalassemia repository. Hemoglobin, 19, 213 236.
- 3 Camaschella, C., Bertero, M.T., Serra, A., Dall'acqua, M., Gasparini, P., Trento, M., Vettore, L., Perona, G., Saglio, G., Mazza, U. (1987) A benign form of thalassaemia intermedia may be determined by the interaction of triplicated α locus and heterozygous β-thalassaemia. British Journal of Haematology, 66, 103 107.
- 4 Camaschella, C., Maza, U., Roetto, A., Gottardi, E., Parziale, A., Travi, M., Fattore, S., Bacchiega, D., Fiorelli, G., Cappellini, M.D. (1995) Genetic interactions in thalassemia intermedia: analysis of β-mutations, α-genotype, γ-promoters, and β-LCR hypersensitive sites 2 and 4 in Italian patients. American Journal of Hematology, 48, 82 87.
- 5 Chehab, F.F., Der Kaloustian, V., Khouri, F.P., Deeb, S.S., Kan, Y.W. (1987) The molecular basis of β-thalassemia in Lebanon: application of prenatal diagnosis. Blood, 69, 1141 1145.
- 6 Clegg, J.B., Naughton, M.A., Weatherall, D.J. (1968) Separation of the alpha and beta chains of human haemoglobin. Nature, 219, 69 70.
- 7 Craig, J.E., Rochette, J., Fisher, C.A., Weatherall, D.J., Marc, S., Lathrop, G.M., Demenais, F., Thein, S.L. (1996) Dissecting the loci controlling fetal haemoglobin production on chromosomes 11p and 6q by the regressive approach. Nature Genetics, 12, 58 64.
- 8 Craig, J.E., Sheerin, S.M., Barnetson, R., Thein, S.L. (1993) The molecular basis of HPFH in a British family identified by heteroduplex formation. British Journal of Haematology, 84, 106 110.
- 9 Diaz-Chico, J.C., Yang, K.G., Stoming, T.A., Efremov, D.G., Kutlar, A., Kutlar, F., Aksoy, M., Altay, C., Gurgey, A., Kilinc, Y., Huisman, T.H.J. (1988) Mild and severe β-thalassemia among homozygotes from Turkey: identification of the types by hybridization of amplified DNA with synthetic probes. Blood, 71, 248 251.
- 10 Galanello, R., Dessi, E., Melis, M.A., Addis, M., Sanna, M.A., Rosatelli, C., Argiolu, F., Giagu, N., Turco, M.P., Cacace, E., Pirastu, M.M., Cao, A. (1989) Molecular analysis of β°-thalassemia intermedia in Sardinia. Blood, 74, 823 827.
- 11 Ghanem, N., Girodon, E., Vidaud, M., Martin, J., Fanen, P., Plassa, F., Goossens, M. (1992) A comprehensive scanning method for rapid detection of β globin gene mutations and polymorphisms. Human Mutations, 1, 229.
- 12 Gianni, A.M., Bregni, M., Cappellini, M.D., Fiorelli, G., Taramelli, R., Giglioni, B., Comi, P., Ottolenghi, S. (1983) A gene controlling fetal hemoglobin expression in adults is not linked to the non-α globin cluster. EMBO Journal, 2, 921 925.
- 13 Gilman, J.G. & Huisman, T.H.J. (1985) DNA sequence variation associated with elevated fetal Gγ globin production. Blood, 66, 783 787.
- 14 Hall, G.W., Barnetson, R.A., Thein, S.L. (1992) Beta thalassaemia in the indigenous British population. British Journal of Haematology, 82, 584.
- 15 Hall, G.W., Franklin, I.M., Sura, T., Thein, S.L. (1991) A novel mutation (nonsense β127) in exon 3 of the β globin gene produces a variable thalassaemia phenotype. British Journal of Haematology, 79, 342 344.
- 16 Ho, P.J., Rochette, J., Fisher, C.A., Wonke, B., Jarvis, M.K., Yardumian, A., Thein, S.L. (1996) Moderate reduction of β globin gene transcript by a novel mutation in the 5′ untranslated region: a study of its interaction with other genotypes in two families. Blood, 87, 1170 1178.
- 17 Kulozik, A.E., Thein, S.L., Wainscoat, J.S., Gale, R., Kay, L.A., Wood, J.K., Weatherall, D.J., Huehns, E.R. (1987) Thalassaemia intermedia: interaction of the triple α-globin gene arrangement and heterozygous β thalassaemia. British Journal of Haematology, 66, 109 112.
- 18 Labie, D., Pagnier, J., Lapoumeroulie, C., Rouabhi, F., Dunda-Belkhodja, O., Chardin, P., Beldjord, C., Wajcman, H., Fabry, M.E., Nagel, R.L. (1985) Common haplotype dependency of high Gγ-globin gene expression and high Hb F levels in β-thalassemia and sickle cell anemia patients . Proceedings of the National Academy of Sciences of the United States of America, 82, 2111 2114.
- 19 Meloni, A., Rosatelli, M.C., Faa, V., Sardu, R., Saba, L., Murru, S., Sciarratta, G.V., Baldi, M., Tannoia, N. (1992) Promoter mutations producing mild β-thalassaemia in the Italian population. British Journal of Haematology, 80, 222 226.
- 20 Murru, S., Loudianos, G., Porcu, S., Sciarratta, G.V., Agosti, S., Parodi, M.I., Cao, A., Pirastu, M. (1992) A β-thalassaemia phenotype not linked to the β-globin cluster in an Italian family. British Journal of Haematology, 81, 283 287.
- 21 Old, J.M., Varawalla, N.Y., Weatherall, D.J. (1990) Rapid detection and prenatal diagnosis of β-thalassaemia: studies in Indian and Cypriot populations in the UK. Lancet, 336, 834 837.
- 22 Olds, R.J., Sura, T., Jackson, B., Wonke, B., Hoffbrand, A.V., Thein, S.L. (1991) A novel δ° mutation in cis with Hb Knossos: a study of different genetic interactions in three Egyptian families. British Journal of Haematology, 78, 430 436.
- 23 Orkin, S.H., Kazazian, H.H.J., Antonarakis, S.E., Goff, S.C., Boehm, C.D., Sexton, J.P., Waber, P.G., Giardina, P.J.V. (1982) Linkage of β-thalassaemia mutations and β-globin gene polymorphisms with DNA polymorphisms in human β-globin gene cluster. Nature, 296, 627 631.
- 24 Oron, V., Filon, D., Oppenheim, A., Rund, D. (1994) Severe thalassaemia intermedia caused by interaction of homozygosity for α-globin gene triplication with heterozygosity for β°-thalassaemia. British Journal of Haematology, 86, 377 379.
- 25 Ristaldi, M.S., Murru, S., Loudianos, G., Casula, L., Porcu, S., Pigheddu, D., Fanni, B., Sciaratta, G.V., Agosti, S., Parodi, M.I., Leone, D., Camaschella, C., Serra, A., Pirastu, M., Cao, A. (1990) The C → T substitution in the distal CACCC box of the β-globin gene promoter is a common cause of silent β thalassaemia in the Italian population. British Journal of Haematology, 74, 480 486.
- 26
Rund, D.,
Oron-Karni, V.,
Filon, D.,
Goldfarb, A.,
Rachmilewitz, E.,
Oppenheim, A. (1997) Genetic analysis of β-thalassaemia intermedia in Israel: diversity of mechanisms and unpredictability of phenotype.
American Journal of Hematology, 54, 16 22.
10.1002/(SICI)1096-8652(199701)54:1<16::AID-AJH3>3.0.CO;2-7 CAS PubMed Web of Science® Google Scholar
- 27 Sambrook, J., Fritsch, E.F., Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory, New York.
- 28 Sharpe, J.A. & Wood, W.G. (1989) Haemoglobin analysis. Laboratory Haematology (ed. by I. Chanarin), pp. 33 54. Churchill Livingstone, Edinburgh.
- 29 Tamagnini, G.P., Lopes, M.C., Castanheira, M.E., Wainscoat, J.S. (1983) β+ Thalassaemia Portuguese type: clinical, haematological and molecular studies of a newly defined form of β thalassaemia. British Journal of Haematology, 54, 189 200.
- 30 Thein, S.L. (1993) β-Thalassaemia. Bailliére's Clinical Haematology. International Practice and Research: The Haemoglobinopathies (ed. by D. R. Higgs and D. J. Weatherall), pp. 171 176. Baillière Tindall, London.
- 31 Thein, S.L., Best, S., Sharpe, J., Paul, B., Clark, D.J., Brown, M.J. (1991) Hemoglobin Chesterfield (β28 Leu→Arg) produces the phenotype of inclusion body β thalassemia. Blood, 77, 2791 2793.
- 32 Thein, S.L., Ehsani, A., Wallace, R.B. (1993 a) The use of synthetic oligonucleotides as specific hybridization probes in the diagnosis of genetic disorders. Human Genetic Disease Analysis: a Practical Approach (ed. by K. E. Davies), pp. 21 33. IRL Press, Oxford.
- 33 Thein, S.L., Hesketh, C., Taylor, P., Temperley, I.J., Hutchinson, R.M., Old, J.M., Wood, W.G., Clegg, J.B., Weatherall, D.J. (1990) Molecular basis for dominantly inherited inclusion body β-thalassemia. Proceedings of the National Academy of Sciences of the United States of America, 87, 3924 3928.
- 34 Thein, S.L., Hesketh, C., Wallace, R.B., Weatherall, D.J. (1988) The molecular basis of thalassaemia major and thalassaemia intermedia in Asian Indians: application to prenatal diagnosis. British Journal of Haematology, 70, 225 231.
- 35 Thein, S.L. & Hinton, J. (1991) A simple and rapid method of direct sequencing using Dynabeads. British Journal of Haematology, 79, 113 115.
- 36 Thein, S.L., Sampietro, M., Rohde, K., Rochette, J., Weatherall, D.J., Lathrop, G.M., Demenais, F. (1994) Detection of a major gene for heterocellular hereditary persistence of fetal hemoglobin after accounting for genetic modifiers. American Journal of Human Genetics, 54, 214 228.
- 37 Thein, S.L., Wainscoat, J.S., Sampietro, M., Old, J.M., Cappellini, D., Fiorelli, G., Modell, B., Weatherall, D.J. (1987) Association of thalassaemia intermedia with a beta-globin gene haplotype. British Journal of Haematology, 65, 367 373.
- 38 Thein, S.L., Wood, W.G., Wickramasinghe, S.N., Galvin, M.C. (1993 b) β-Thalassemia unlinked to the β-globin gene in an English family. Blood, 82, 961 967.
- 39 Thorpe, S.J., Thein, S.L., Sampietro, M., Craig, J.E., Mahon, B., Huehns, E.R. (1994) Immunochemical estimation of haemoglobin types in red blood cells by FACS analysis. British Journal of Haematology, 87, 125 132.
- 40 Wainscoat, J.S., Kanavakis, E., Wood, W.G., Letsky, E.A., Huehns, E.R., Marsh, G.W., Higgs, D.R., Clegg, J.B., Weatherall, D.J. (1983) Thalassaemia intermedia in Cyprus: the interaction of α and β-thalassaemia. British Journal of Haematology, 53, 411 416.
- 41 Weatherall, D.J. & Clegg, J.B. (1981) The Thalassaemia Syndromes. Blackwell Scientific Publications, Oxford.
- 42 Wong, C., Antonarakis, S.E., Goff, S.C., Orkin, S.H., Forget, B.G., Nathan, D.G., Giardina, P.J.V., Kazazian, H.H.J. (1989) β-Thalassemia due to two novel nucleotide substitutions in consensus acceptor splice sequences of the β-globin gene. Blood, 73, 914 918.
- 43 Wong, C., Dowling, C.E., Saiki, R.K., Higuchi, R.G., Erlich, H.A., Kazazian, H.H.J. (1987) Characterization of β-thalassaemia mutations using direct genomic sequencing of amplified single copy DNA. Nature, 330, 384 386.
- 44 Yang, K.G., Kutlar, F., George, E., Wilson, J.B., Kutlar, A., Stoming, T.A., Gonzalez-Redondo, J.M., Huisman, T.H.J. (1989) Molecular characterization of β-globin gene mutations in Malay patients with Hb E-β-thalassaemia and thalassaemia major. British Journal of Haematology, 72, 73.