Autocalibrating parallel imaging of in vivo trabecular bone microarchitecture at 3 Tesla
Corresponding Author
S. Banerjee
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
1700 4th Street, QB3 Building, Suite 201, University of California-San Francisco, San Francisco, CA 94158===Search for more papers by this authorS. Choudhury
Electrical and Computer Engineering, University of California–Santa Barbara, Santa Barbara, California, USA
Search for more papers by this authorE.T. Han
Global Applied Science Laboratory, GE Healthcare, Menlo Park, California, USA
Search for more papers by this authorA.C.S. Brau
Global Applied Science Laboratory, GE Healthcare, Menlo Park, California, USA
Search for more papers by this authorC.V. Morze
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorD.B. Vigneron
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorS. Majumdar
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorCorresponding Author
S. Banerjee
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
1700 4th Street, QB3 Building, Suite 201, University of California-San Francisco, San Francisco, CA 94158===Search for more papers by this authorS. Choudhury
Electrical and Computer Engineering, University of California–Santa Barbara, Santa Barbara, California, USA
Search for more papers by this authorE.T. Han
Global Applied Science Laboratory, GE Healthcare, Menlo Park, California, USA
Search for more papers by this authorA.C.S. Brau
Global Applied Science Laboratory, GE Healthcare, Menlo Park, California, USA
Search for more papers by this authorC.V. Morze
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorD.B. Vigneron
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorS. Majumdar
Department of Radiology, University of California–San Francisco, San Francisco, California, USA
Joint Graduate Group in Bioengineering, University of California–Berkeley and University of California–San Francisco, San Francisco, California, USA
Search for more papers by this authorAbstract
In this work the generalized autocalibrating partially parallel acquisition (GRAPPA) technique was implemented with modified reconstruction and applied to in vivo high-resolution (HR) magnetic resonance imaging (MRI) of the trabecular bone microarchitecture at 3 Tesla (T) with a multiple-acquisition balanced steady-state free precession (b-SSFP) sequence. Trabecular bone is made up of a network of microstructures (80–140 μm), and its structural deterioration is associated with the skeletal metabolic disorder osteoporosis. HR-MRI is a promising noninvasive tool for assessing the trabecular microarchitecture in vivo, but it involves long acquisition times. Using partially parallel imaging (PPI) to accelerate the acquisition may help mitigate this shortcoming and allow more flexibility in protocol design. In this study the effects of GRAPPA-based reconstruction on image characteristics and the measurement of trabecular bone structural parameters were evaluated. Initial studies showed that image quality and depiction of microstructure were preserved in the GRAPPA-based reconstruction, indicating the feasibility of PPI in HR-MRI of trabecular bone. The results also demonstrated the potential of PPI for increasing the signal-to-noise ratio (SNR) efficiency of multiple-acquisition b-SSFP imaging protocols. Magn Reson Med, 2006. © 2006 Wiley-Liss, Inc.
REFERENCES
- 1 Sodickson DK, Manning WJ. Simultaneous acquisition of spatial harmonics (SMASH): fast imaging with radiofrequency coil arrays. Magn Reson Med 1997; 38: 591–603.
- 2
Pruessmann KP,
Weiger M,
Scheidegger MB,
Boesiger P.
SENSE: sensitivity encoding for fast MRI.
Magn Reson Med
1999;
42:
952–962.
10.1002/(SICI)1522-2594(199911)42:5<952::AID-MRM16>3.0.CO;2-S CAS PubMed Web of Science® Google Scholar
- 3 Sodickson DK, McKenzie CA. A generalized approach to parallel magnetic resonance imaging. Med Phys 2001; 28: 1629–1643.
- 4 Roemer PB, Edelstein WA, Hayes CE, Souza SP, Mueller OM. The NMR phased array. Magn Reson Med 1990; 16: 192–225.
- 5 Jakob PM, Griswold MA, Edelman RR, Sodickson DK. AUTO-SMASH: a self-calibrating technique for SMASH imaging. Simultaneous acquisition of spatial harmonics. MAGMA 1998; 7: 42–54.
- 6 Heidemann RM, Griswold MA, Haase A, Jakob PM. VD-AUTO-SMASH imaging. Magn Reson Med 2001; 45: 1066–1074.
- 7 Griswold MA, Jakob PM, Heidemann RM, Nittka M, Jellus V, Wang J, Kiefer B, Haase A. Generalized autocalibrating partially parallel acquisitions (GRAPPA). Magn Reson Med 2002; 47: 1202–1210.
- 8 Wang Z, Wang J, Detre JA. Improved data reconstruction method for GRAPPA. Magn Reson Med 2005; 54: 738–742.
- 9 Qu P, Shen GX, Wang C, Wu B, Yuan J. Tailored utilization of acquired k-space points for GRAPPA reconstruction. J Magn Reson 2005; 174: 60–67.
- 10 Park J, Zhang Q, Jellus V, Simonetti O, Li D. Artifact and noise suppression in GRAPPA imaging using improved k-space coil calibration and variable density sampling. Magn Reson Med 2005; 53: 186–193.
- 11 Griswold MA, Kannengiesser S, Heidemann RM, Wang J, Jakob PM. Field-of-view limitations in parallel imaging. Magn Reson Med 2004; 52: 1118–1126.
- 12 Newitt DC, van Rietbergen B, Majumdar S. Processing and analysis of in vivo high-resolution MR images of trabecular bone for longitudinal studies: reproducibility of structural measures and micro-finite element analysis derived mechanical properties. Osteoporos Int 2002; 13: 278–287.
- 13 Majumdar S. A review of magnetic resonance (MR) imaging of trabecular bone micro-architecture: contribution to the prediction of biomechanical properties and fracture prevalence. Technol Health Care 1998; 6: 321–327.
- 14 Wehrli FW, Ford JC, Haddad JG. Osteoporosis: clinical assessment with quantitative MR imaging in diagnosis. Radiology 1995; 196: 631–641.
- 15 Majumdar S. Magnetic resonance imaging of trabecular bone structure. Top Magn Reson Imaging 2002; 13: 323–334.
- 16 Ma J, Wehrli FW, Song HK. Fast 3D large-angle spin-echo imaging (3D FLASE). Magn Reson Med 1996; 35: 903–910.
- 17 Magland J, Vasilic B, Wehrli FW. Fast low-angle dual spin-echo (FLADE): a new robust pulse sequence for structural imaging of trabecular bone. Magn Reson Med 2006; 55: 465–471.
- 18 Majumdar S, Genant HK. Assessment of trabecular structure using high resolution magnetic resonance imaging. Stud Health Technol Inform 1997; 40: 81–96.
- 19 Banerjee S, Han ET, Krug R, Newitt DC, Majumdar S. Application of refocused steady-state free-precession methods at 1.5 and 3 T to in vivo high-resolution MRI of trabecular bone: simulations and experiments. J Magn Reson Imaging 2005; 21: 818–825.
- 20 Krug R, Banerjee S, Han ET, Newitt DC, Link TM, Majumdar S. Feasibility of in vivo structural analysis of high-resolution magnetic resonance images of the proximal femur. Osteoporos Int 2005; 16: 1307–1314.
- 21 Vasilic B, Ladinsky GA, Saha PK, Wehrli FW. Micro-MRI based image acquisition and processing system for assessing the response to therapeutic intervention. In: Medical Imaging, Proceedings of the International Society for Optical Engineering, San Diego, USA, 2006.
- 22 Casselman JW, Kuhweide R, Deimling M, Ampe W, Dehaene I, Meeus L. Constructive interference in steady state–3DFT MR imaging of the inner ear and cerebellopontine angle. AJNR Am J Neuroradiol 1993; 14: 47–57.
- 23 Bangerter NK, Hargreaves BA, Vasanawala SS, Pauly JM, Gold GE, Nishimura DG. Analysis of multiple-acquisition SSFP. Magn Reson Med 2004; 51: 1038–1047.
- 24 Blaimer M, Breuer F, Mueller M, Heidemann RM, Griswold MA, Jakob PM. SMASH, SENSE, PILS, GRAPPA: how to choose the optimal method. Top Magn Reson Imaging 2004; 15: 223–236.
- 25 Banerjee S, Majumdar S. Characterization of high resolution MR images reconstructed by a GRAPPA based parallel technique. In: Medical Imaging, Proceedings of the International Society for Optical Engineering, San Diego, 2006.
- 26 Hargreaves BA, Vasanawala SS, Pauly JM, Nishimura DG. Characterization and reduction of the transient response in steady-state MR imaging. Magn Reson Med 2001; 46: 149–158.
- 27 Morze C, Banerjee S, Tropp J, Karponidis K, Carvajal L, Vigneron DB, Majumdar S. A non-overlapping phased array coil for parallel imaging of the hip at 3.0 T. In: Proceedings of the 14th Annual Meeting of ISMRM, Seattle, WA, USA, 2006.
- 28 Breuer FA, Blaimer M, Muller MF, Heidemann RM, Griswold MA, Jakob PA. The use of principal component analysis (PCA) for estimation of the maximum reduction factor in 2D parallel imaging. In: Proceedings of the 13th Annual Meeting of ISMRM, Miami Beach, FL, USA, 2005. p 2668.
- 29 Hayes MH. Discrete-time random processes. statistical digital signal processing and modeling. New York: John Wiley and Sons, Inc.; 1996. p 81–85.
- 30 Hayes MH. Spectrum estimation. statistical digital signal processing and modeling. New York: John Wiley and Sons, Inc.; 1996. p 393–426.
- 31 Dietrich O, Reeder SB, Reiser MF, Schoenberg SO. Influence of parallel imaging and other reconstruction techniques on the measurement of signal-to-noise ratios. In: Proceedings of the 13th Annual Meeting of ISMRM, Miami Beach, FL, USA, 2005. p 158.
- 32 Carballido J, Gamio JC, Majumdar S. Fuzzy logic applied to MRI trabecular bone analysis. In: Proceedings of the 13th Annual Meeting of ISMRM, Miami Beach, FL, USA, 2005. p 1988.
- 33 Weiger M, Boesiger P, Hilfiker PR, Weishaupt D, Pruessmann KP. Sensitivity encoding as a means of enhancing the SNR efficiency in steady-state MRI. Magn Reson Med 2005; 53: 177–185.