Improving regulatory T cell production through mechanosensing
Lingting Shi
Department of Biomedical Engineering, Columbia University, New York, New York, USA
Search for more papers by this authorJee Yoon Lim
Department of Biological Sciences, Columbia University, New York, New York, USA
Search for more papers by this authorCorresponding Author
Lance C. Kam
Department of Biomedical Engineering, Columbia University, New York, New York, USA
Correspondence
Lance C. Kam, 351 Engineering Terrace, Mail Code 8904, New York, NY 10027, USA.
Email: [email protected]
Search for more papers by this authorLingting Shi
Department of Biomedical Engineering, Columbia University, New York, New York, USA
Search for more papers by this authorJee Yoon Lim
Department of Biological Sciences, Columbia University, New York, New York, USA
Search for more papers by this authorCorresponding Author
Lance C. Kam
Department of Biomedical Engineering, Columbia University, New York, New York, USA
Correspondence
Lance C. Kam, 351 Engineering Terrace, Mail Code 8904, New York, NY 10027, USA.
Email: [email protected]
Search for more papers by this authorAbstract
Induced Tregs (iTregs) have great promise in adoptive immunotherapy for treatment of autoimmune diseases. This report investigates the impacts of substrate stiffness on human Treg induction, providing a powerful yet simple approach to improving production of these cells. Conventional CD4+ human T cells were activated on materials of different elastic modulus and cultured under suppressive conditions. Enhanced Treg induction was observed on softer materials as early as 3 days following activation and persisted for multiple weeks. Substrate stiffness also affected epigenetic modification of Treg specific genes and Treg suppressive capacity. Tregs induced on substrates of an optimal stiffness balance quantity and suppressive quality.
CONFLICT OF INTEREST STATEMENT
The authors declare no conflict of interest.
Open Research
DATA AVAILABILITY STATEMENT
The data that support the findings of this study are available from the corresponding author upon reasonable request.
Supporting Information
Filename | Description |
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jbma37702-sup-0001-Figures.docxWord 2007 document , 7.6 MB | Figure S1. Contour plots of SSC-A and FSC-A for PDMS substrate to assess T cell activation. Gates were set on the cell population outside of the main population of unstimulated sample. Figure S2. Stiffness dependent Treg induction. (A) Median Fluorescence Intensity (MFI) of FOXP3+ cells, activated on PDMS of the indicated stiffness, on D3 and D6. (B & C) Comparison between 870 kPa PDMS substrate and rigid controls based on (B) Percent (C) Total count of FOXP3+ cells. Data are mean ± SEM., n = 5; * p < .05, ** p < .01, *** p < .001, **** p < .0001, two-way ANOVA with Tukey multiple comparisons. Figure S3. Substrate stiffness modulates T cell suppressive function. (A) Representative CFSE data comparing 2600 kPa with controls. (B) Percent suppression with 1:1, 1:2, and 1:4 ratios of Treg and Tconvs comparing 2600 kPa to plate-bound control and Dynabeads. Data are mean, whiskers are min and max, n = 3 individual experiments; One-way ANOVA; * p < .05, ** p < .01. Figure S4. Differential methylation analysis on Treg epigenetic profiles. (A) Volcano plot of differentially methylation analysis comparing 2,600kPa and 2600 kPa PDMS treated with Y-27632. (B) Volcano plot of differentially methylation analysis comparing Tconvs to plate-bound control. |
Please note: The publisher is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.
REFERENCES
- 1Li YF, Zhang SX, Ma XW, et al. The proportion of peripheral regulatory T cells in patients with multiple sclerosis: a meta-analysis. Mult Scler Relat Disord. 2019; 28: 75-80.
- 2Kouchaki E, Salehi M, Reza Sharif M, Nikoueinejad H, Akbari H. Numerical status of CD4(+)CD25(+)FoxP3(+) and CD8(+)CD28(−) regulatory T cells in multiple sclerosis. Iran J Basic Med Sci. 2014; 17(4): 250-255.
- 3Jamshidian A, Shaygannejad V, Pourazar A, Zarkesh-Esfahani SH, Gharagozloo M. Biased Treg/Th17 balance away from regulatory toward inflammatory phenotype in relapsed multiple sclerosis and its correlation with severity of symptoms. J Neuroimmunol. 2013; 262(1–2): 106-112.
- 4Lifshitz GV, Zhdanov DD, Lokhonina AV, et al. Ex vivo expanded regulatory T cells CD4(+)CD25(+)FoxP3(+)CD127(low) develop strong immunosuppressive activity in patients with remitting-relapsing multiple sclerosis. Autoimmunity. 2016; 49(6): 388-396.
- 5Venken K, Hellings N, Thewissen M, et al. Compromised CD4+ CD25(high) regulatory T-cell function in patients with relapsing-remitting multiple sclerosis is correlated with a reduced frequency of FOXP3-positive cells and reduced FOXP3 expression at the single-cell level. Immunology. 2008; 123(1): 79-89.
- 6Crispin JC, Martı́nez A, Alcocer-Varela J. Quantification of regulatory T cells in patients with systemic lupus erythematosus. J Autoimmun. 2003; 21(3): 273-276.
- 7Saruta M, Yu QT, Fleshner PR, et al. Characterization of FOXP3+CD4+ regulatory T cells in Crohn's disease. Clin Immunol. 2007; 125(3): 281-290.
- 8Maul J, Loddenkemper C, Mundt P, et al. Peripheral and intestinal regulatory CD4+ CD25(high) T cells in inflammatory bowel disease. Gastroenterology. 2005; 128(7): 1868-1878.
- 9Miyara M, Amoura Z, Parizot C, et al. Global natural regulatory T cell depletion in active systemic lupus erythematosus. J Immunol. 2005; 175(12): 8392-8400.
- 10Liu MF, Wang CR, Fung LL, Wu CR. Decreased CD4+CD25+ T cells in peripheral blood of patients with systemic lupus erythematosus. Scand J Immunol. 2004; 59(2): 198-202.
- 11Alvarado-Sanchez B et al. Regulatory T cells in patients with systemic lupus erythematosus. J Autoimmun. 2006; 27(2): 110-118.
- 12Feger U, Luther C, Poeschel S, Melms A, Tolosa E, Wiendl H. Increased frequency of CD4+ CD25+ regulatory T cells in the cerebrospinal fluid but not in the blood of multiple sclerosis patients. Clin Exp Immunol. 2007; 147(3): 412-418.
- 13Venken K, Hellings N, Hensen K, et al. Secondary progressive in contrast to relapsing-remitting multiple sclerosis patients show a normal CD4+CD25+ regulatory T-cell function and FOXP3 expression. J Neurosci Res. 2006; 83(8): 1432-1446.
- 14Haas J, Hug A, Viehöver A, et al. Reduced suppressive effect of CD4+CD25high regulatory T cells on the T cell immune response against myelin oligodendrocyte glycoprotein in patients with multiple sclerosis. Eur J Immunol. 2005; 35(11): 3343-3352.
- 15Dhaeze T, Peelen E, Hombrouck A, et al. Circulating follicular regulatory T cells are defective in multiple sclerosis. J Immunol. 2015; 195(3): 832-840.
- 16Viglietta V, Baecher-Allan C, Weiner HL, Hafler DA. Loss of functional suppression by CD4+CD25+ regulatory T cells in patients with multiple sclerosis. J Exp Med. 2004; 199(7): 971-979.
- 17Ferraro A, Socci C, Stabilini A, et al. Expansion of Th17 cells and functional defects in T regulatory cells are key features of the pancreatic lymph nodes in patients with type 1 diabetes. Diabetes. 2011; 60(11): 2903-2913.
- 18Brusko TM, Wasserfall CH, Clare-Salzler MJ, Schatz DA, Atkinson MA. Functional defects and the influence of age on the frequency of CD4+ CD25+ T-cells in type 1 diabetes. Diabetes. 2005; 54(5): 1407-1414.
- 19Lindley S, Dayan CM, Bishop A, Roep BO, Peakman M, Tree TIM. Defective suppressor function in CD4(+)CD25(+) T-cells from patients with type 1 diabetes. Diabetes. 2005; 54(1): 92-99.
- 20Gliwinski M et al. Cell-based therapies with T regulatory cells. BioDrugs. 2017; 31(4): 335-347.
- 21Theil A, Tuve S, Oelschlägel U, et al. Adoptive transfer of allogeneic regulatory T cells into patients with chronic graft-versus-host disease. Cytotherapy. 2015; 17(4): 473-486.
- 22Brunstein CG, Miller JS, McKenna DH, et al. Umbilical cord blood-derived T regulatory cells to prevent GVHD: kinetics, toxicity profile, and clinical effect. Blood. 2016; 127(8): 1044-1051.
- 23Todo S, Yamashita K, Goto R, et al. A pilot study of operational tolerance with a regulatory T-cell-based cell therapy in living donor liver transplantation. Hepatology. 2016; 64(2): 632-643.
- 24Trzonkowski P, Bieniaszewska M, Juścińska J, et al. First-in-man clinical results of the treatment of patients with graft versus host disease with human ex vivo expanded CD4+CD25+CD127- T regulatory cells. Clin Immunol. 2009; 133(1): 22-26.
- 25Gladstone DE, Kim BS, Mooney K, Karaba AH, D'Alessio FR. Regulatory T cells for treating patients with COVID-19 and acute respiratory distress syndrome: two case reports. Ann Intern Med. 2020; 173(10): 852-853.
- 26Dall'Era M, Pauli ML, Remedios K, et al. Adoptive Treg cell therapy in a patient with systemic lupus erythematosus. Arthritis Rheumatol. 2019; 71(3): 431-440.
- 27Bluestone JA, Buckner JH, Fitch M, et al. Type 1 diabetes immunotherapy using polyclonal regulatory T cells. Sci Transl Med. 2015; 7(315):315ra189.
- 28Marek-Trzonkowska N, Myśliwiec M, Iwaszkiewicz-Grześ D, et al. Factors affecting long-term efficacy of T regulatory cell-based therapy in type 1 diabetes. J Transl Med. 2016; 14(1): 332.
- 29Marek-Trzonkowska N, Myśliwiec M, Dobyszuk A, et al. Therapy of type 1 diabetes with CD4(+)CD25(high)CD127-regulatory T cells prolongs survival of pancreatic islets - results of one year follow-up. Clin Immunol. 2014; 153(1): 23-30.
- 30Romano M, Fanelli G, Albany CJ, Giganti G, Lombardi G. Past, present, and future of regulatory T cell therapy in transplantation and autoimmunity. Front Immunol. 2019; 10: 43.
- 31Long SA, Buckner JH. CD4+FOXP3+ T regulatory cells in human autoimmunity: more than a numbers game. J Immunol. 2011; 187(5): 2061-2066.
- 32Haribhai D, Williams JB, Jia S, et al. A requisite role for induced regulatory T cells in tolerance based on expanding antigen receptor diversity. Immunity. 2011; 35(1): 109-122.
- 33MacMillan ML et al. First-in-human phase 1 trial of induced regulatory T cells for graft-versus-host disease prophylaxis in HLA-matched siblings. Blood Adv. 2021; 5(5): 1425-1436.
- 34Hsieh CS, Liang Y, Tyznik AJ, Self SG, Liggitt D, Rudensky AY. Recognition of the peripheral self by naturally arising CD25+ CD4+ T cell receptors. Immunity. 2004; 21(2): 267-277.
- 35Shi L, Lim JY, Kam LC. Substrate stiffness enhances human regulatory T cell induction and metabolism. Biomaterials. 2022; 292:121928.
- 36Nataraj NM, Dang AP, Kam LC, Lee JH. Ex vivo induction of regulatory T cells from conventional CD4(+) T cells is sensitive to substrate rigidity. J Biomed Mater Res A. 2018; 106(12): 3001-3008.
- 37Ferrari S, Pesce M. Cell-based Mechanosensation, epigenetics, and non-coding RNAs in progression of cardiac fibrosis. Int J Mol Sci. 2020; 21(1): 28.
- 38Zhao XB, Chen YP, Tan M, et al. Extracellular matrix stiffness regulates DNA methylation by PKCalpha-dependent nuclear transport of DNMT3L. Adv Healthc Mater. 2021; 10(16):e2100821.
- 39Killaars AR, Grim JC, Walker CJ, Hushka EA, Brown TE, Anseth KS. Extended exposure to stiff microenvironments leads to persistent chromatin remodeling in human mesenchymal stem cells. Adv Sci (Weinh). 2019; 6(3):1801483.
- 40Someya K, Nakatsukasa H, Ito M, et al. Improvement of Foxp3 stability through CNS2 demethylation by TET enzyme induction and activation. Int Immunol. 2017; 29(8): 365-375.
- 41Piotrowska M, Gliwiński M, Trzonkowski P, Iwaszkiewicz-Grzes D. Regulatory T cells-related genes are under DNA methylation influence. Int J Mol Sci. 2021; 22(13):7144.
- 42O'Connor RS et al. Substrate rigidity regulates human T cell activation and proliferation. J Immunol. 2012; 189(3): 1330-1339.
- 43Tone Y, Furuuchi K, Kojima Y, Tykocinski ML, Greene MI, Tone M. Smad3 and NFAT cooperate to induce Foxp3 expression through its enhancer. Nat Immunol. 2008; 9(2): 194-202.
- 44Vent-Schmidt J, Han JM, MacDonald KG, Levings MK. The role of FOXP3 in regulating immune responses. Int Rev Immunol. 2014; 33(2): 110-128.
- 45Holle AW, Engler AJ. More than a feeling: discovering, understanding, and influencing mechanosensing pathways. Curr Opin Biotechnol. 2011; 22(5): 648-654.
- 46Wang HQ, Tuominen LK, Tsai CJ. SLIM: a sliding linear model for estimating the proportion of true null hypotheses in datasets with dependence structures. Bioinformatics. 2011; 27(2): 225-231.
- 47Lambert LH, Goebrecht GKE, de Leo SE, et al. Improving T cell expansion with a soft touch. Nano Lett. 2017; 17(2): 821-826.
- 48Yuan DJ, Shi L, Kam LC. Biphasic response of T cell activation to substrate stiffness. Biomaterials. 2021; 273: 120797.
- 49Hefazi M, Bolivar-Wagers S, Blazar BR. Regulatory T cell therapy of graft-versus-host disease: advances and challenges. Int J Mol Sci. 2021; 22(18):9676.
- 50Hoffmann P, Ermann J, Edinger M, Fathman CG, Strober S. Donor-type CD4(+)CD25(+) regulatory T cells suppress lethal acute graft-versus-host disease after allogeneic bone marrow transplantation. J Exp Med. 2002; 196(3): 389-399.
- 51Paszek MJ, Zahir N, Johnson KR, et al. Tensional homeostasis and the malignant phenotype. Cancer Cell. 2005; 8(3): 241-254.
- 52Miyazawa A, Ito S, Asano S, et al. Regulation of PD-L1 expression by matrix stiffness in lung cancer cells. Biochem Bioph Res Co. 2018; 495(3): 2344-2349.
- 53Itoh Y, Takehara Y, Kawase T, et al. Feasibility of magnetic resonance elastography for the pancreas at 3T. J Magn Reson Imaging. 2016; 43(2): 384-390.
- 54Ohkura N, Hamaguchi M, Morikawa H, et al. T cell receptor stimulation-induced epigenetic changes and Foxp3 expression are independent and complementary events required for Treg cell development. Immunity. 2012; 37(5): 785-799.
- 55Wakamatsu E, Omori H, Kawano A, Ogawa S, Abe R. Strong TCR stimulation promotes the stabilization of Foxp3 expression in regulatory T cells induced in vitro through increasing the demethylation of Foxp3 CNS2. Biochem Biophys Res Commun. 2018; 503(4): 2597-2602.
- 56Schmidl C, Klug M, Boeld TJ, et al. Lineage-specific DNA methylation in T cells correlates with histone methylation and enhancer activity. Genome Res. 2009; 19(7): 1165-1174.
- 57Ohkura N, Sakaguchi S. Transcriptional and epigenetic basis of Treg cell development and function: its genetic anomalies or variations in autoimmune diseases. Cell Res. 2020; 30(6): 465-474.
- 58Lu J, Liang Y, Meng H, Zhang A, Zhao J, Zhang C. Metabolic controls on epigenetic reprogramming in regulatory T cells. Front Immunol. 2021; 12:728783.
- 59Wahl A, Dinet C, Dillard P, et al. Biphasic mechanosensitivity of T cell receptor-mediated spreading of lymphocytes. Proc Natl Acad Sci USA. 2019; 116(13): 5908-5913.
- 60Collison LW, Vignali DA. In vitro Treg suppression assays. Methods Mol Biol. 2011; 707: 21-37.
- 61McMurchy AN, Levings MK. Suppression assays with human T regulatory cells: a technical guide. Eur J Immunol. 2012; 42(1): 27-34.
- 62Akalin A, Kormaksson M, Li S, et al. methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles. Genome Biol. 2012; 13(10): R87.