4 Autophagy and Vacuole Formation
Annual Plant Reviews book series, Volume 5: Vacuolar Compartments
Yuji Moriyasu,
Stefan Hillmer,
Yuji Moriyasu
School of Food and Nutritional Sciences, University of Shizuoka, 52- 1 Ya da, Shizuoka, 422-8526 Japan
Search for more papers by this authorStefan Hillmer
Abteilung Strukturelle Zellphysiologie, Albrecht-von-Haller Institut für Pflanzen-wissenschaften, Universitát Göttingen, Untere Karspüle 2, Göttingen, D-37073 Germany
Search for more papers by this authorYuji Moriyasu,
Stefan Hillmer,
Yuji Moriyasu
School of Food and Nutritional Sciences, University of Shizuoka, 52- 1 Ya da, Shizuoka, 422-8526 Japan
Search for more papers by this authorStefan Hillmer
Abteilung Strukturelle Zellphysiologie, Albrecht-von-Haller Institut für Pflanzen-wissenschaften, Universitát Göttingen, Untere Karspüle 2, Göttingen, D-37073 Germany
Search for more papers by this authorFirst published: 19 April 2018
This article was originally published in 2000 in Vacuolar Compartments, Volume 5 (ISBN 9781841271125) of the Annual Plant Reviews book series, this volume edited by David G. Robinson and John C. Rogers. The article was republished in Annual Plant Reviews online in April 2018.
Abstract
The sections in this article are
- Introduction
- Morphological Evidence for Autophagy in Plant Cells
- Biochemical Characterization of Autophagy in Plant Cells
- Autophagy in Various Developmental Processes in Plant Cells (Figure 4.1) Autophagy in Various Developmental Processes in Plant Cells (Figure 1)
- Starvation-Induced Autophagy
- Does the Cytoplasm to Vacuole Targeting (Cvt) Pathway Exist in Plants?
- Endocytosis and Autophagy
- Future Perspective
References
- Abel, S. and Glund, K. (1986) Localization of RNA-degrading enzyme activity within vacuoles of cultured tomato cells. Physiol. Plant., 66 79-86.
- Amelunxen, F. and Heinze, U. (1984) Zur Entwicklung der Vacuole in Testa-Zellen des Leinsamens (On the development of the vacuole in the testa cells of Linum seeds). Eur. J. Cell Biol., 35 343-54.
- Aubert, S., Gout, E., Bligny, R. and Douce, R. (1994) Multiple effects of glycerol on plant cell metabolism: phosphorus-31 nuclear magnetic resonance studies. J. Biol. Chem., 269 21420-27.
- Aubert, S., Gout, E., Bligny, R., Marty-Mazars, D., Barrieu, F., Alabouvette, J., Marty, F. and Douce, R. (1996) Ultrastructural and biochemical characterization of autophagy in higher plant cells subjected to carbon deprivation: control by the supply of mitochondria with respiratory substrates. J. Cell Biol., 133 1251-63.
- Baba, M., Takeshige, K., Baba, N. and Ohsumi, Y. (1994) Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization. J. Cell Biol., 124 903-13.
- Bagga, S., Adams, H., Kemp, J.D. and Sengupta-Gopalan, C. (1995) Accumulation of 15-kilodalton zein in novel protein bodies in transgenic tobacco. Plant Physiol., 107 13-23.
- Bagga, S., Adams, H.P., Rodriguez, F.D., Kemp, J.D. and Sengupta-Gopalan, C. (1997) Coexpression of the maize δ-zein and β-zein genes results in stable accumulation of δ-zein in endoplasmic reticulum-derived protein bodies formed by β-zein. Plant Cell, 9 1683-96.
- Baumgartner, B., Kende, H. and Matile, P. (1975) Ribonuclease in senescing morning glory: purification and demonstration of de novo synthesis. Plant Physiol., 55 734-37.
- Bechtel, D.B., Frend, A., Kaleikau, L.A., Wilson, J.D. and Shewry, P.R. (1989) Vacuole formation in wheat starchy endosperm. Food Microstr., 8 183-90.
- Bethke, P.C., Swanson, S.J., Hillmer, S. and Jones, R.L. (1998) From storage compartment to lytic organelle: the metamorphosis of the aleurone protein storage vacuole. Ann. Bot. (London), 82 399-412.
- Blommaart, E.F.C., Luiken, J.J.F.P. and Meijer, A.J. (1997) Autophagic proteolysis: control and specificity. Histochem. J., 29 365-85.
- Brouquisse, R., Gaudillère, J.-P. and Raymond, P. (1998) Induction of a carbon-starvation-related proteolysis in whole maize plants submitted to light/dark cycles and to extended darkness. Plant Physiol., 117 1281-91.
- Canut, H., Alibert, G., Carrasco, A. and Boudet, A.M. (1986) Rapid degradation of abnormal proteins in vacuoles from Acer pseudoplatanus L. cells. Plant Physiol., 81 460-63.
- Chen, M.-H., Liu, L.-F., Chen, Y.-R., Wu, H.-K. and Yu, S.-M. (1994) Expression of α-amylases, carbohydrate metabolism, and autophagy in cultured rice cells is coordinately regulated by sugar nutrient. Plant J., 6 625-36.
- Coleman, C.E., Herman, E.M., Takasaki, K. and Larkins, B.A. (1996) The maize γ-zein sequesters α-zein and stabilizes its accumulation in protein bodies of transgenic tobacco endosperm. Plant Cell, 8 2335-45.
- de Duve, C. (1984) A Guided Tour of the Living Cell. Scientific American Books, Inc., New York.
- Dorne, A.-J., Bligny, R., Rébeillé, F., Roby, C. and Douce, R. (1987) Fatty acid disappearance and phosphorylcholine accumulation in higher plant cells after a long period of sucrose deprivation. Plant Physiol. Biochem., 25 589-95.
- Douce, R., Bligny, R., Brown, D., Dorne, A.-J., Genix, P. and Roby, C. (1991) Autophagy triggered by sucrose deprivation in sycamore (Acer pseudoplatanus) cells, in Compartmentation of Plant Metabolism in Non-photosynthetic Tissues (ed. M.J. Emes), Cambridge University Press, Cambridge, New York, Port Chester, Melbourne, Sydney, pp. 127-45.
-
Douce, R., Pascal, N. and Bligny, R. (1992) Macroautophagy triggered by sucrose starvation in higher plant cells: analysis of a model for prolonged carbon deprivation under water stress, in Water and Life (eds. G.N. Somero and C.B. Osmond), Springer-Verlag, Berlin, Heidelberg, pp. 128-40.
10.1007/978-3-642-76682-4_9 Google Scholar
- Dunn, Jr. W.A. (1994) Autophagy and related mechanisms of lysosome-mediated protein degradation. Trends Cell Biol., 4 139-43.
- Fineran, B.A. (1970) Organization of the tonoplast in frozen-etched root tips. J. Ultrastruct. Res., 33 574-86.
- Fukuda, H. (1996) Xylogenesis: initiation, progression, and cell death. Annu. Rev. Plant Physiol. Plant Mol. Biol., 47 299-325.
- Galili, G. and Herman, E.M. (1997) Protein bodies: storage vacuoles in seeds. Adv. Bot. Res., 25 113-40.
- Genix, P., Bligny, R., Martin, J.-B. and Douce, R. (1990) Transient accumulation of asparagine in sycamore cells after a long period of sucrose starvation. Plant Physiol., 94 717-22.
- Gifford, Jr. E.M. and Stewart, K.D. (1968) Inclusions of the proplastids and vacuoles in the shoot apices of Bryophyllum and Kalanchoe. Am. J. Bot., 55 269-79.
- Hara-Nishimura, I., Shimada, T., Hatano, K., Takeuchi, Y. and Nishimura, M. (1998) Transport of storage proteins to protein storage vacuoles is mediated by large precursor-accumulating vesicles. Plant Cell, 10 825-36.
- Hawes, C., Crooks, K., Coleman, J. and Satiat-Jeunemaitre, B. (1995) Endocytosis in plants: fact or artefact? Plant Cell Environ., 18 1245-52.
- Herman, E.M. and Lamb, C.J. (1992) Arabinogalactan-rich glycoproteins are localized on the cell surface and in intravacuolar multivesicular bodies. Plant Physiol., 98 264-72.
- Herman, E.M., Li, X., Su, R.T., Larsen, P., Hsu, H.-T. and Sze, H. (1994) Vacuolar-type H+-ATPases are associated with the endoplasmic reticulum and provacuoles of root tip cells. Plant Physiol., 106 1313-24.
- Herman, E.M., Baumgartner, B. and Chrispeels, M.J. (1981) Uptake and apparent digestion of cytoplasmic organelles by protein bodies (protein storage vacuoles) in mung bean cotyledons. Eur. J. Cell Biol., 24 226-35.
- Hilling, B. and Amelunxen, F. (1985) On the development of the vacuole. II. Further evidence for endoplasmic reticulum origin. Eur. J. Cell Biol., 38 195-200.
- Höfte, H., Faye, L., Dickinson, C., Herman, E.M. and Chrispeels, M.J. (1991) The protein-body proteins phytohemagglutinin and tonoplast intrinsic protein are targeted to vacuoles in leaves of transgenic tobacco. Planta, 184 431-37.
- Hoh, B., Hinz, G., Jeong, B.-K. and Robinson, D.G. (1995) Protein storage vacuoles form de novo during pea cotyledon development. J. Cell Sci., 108 299-310.
- Inada, N., Sakai, A., Kuroiwa, H. and Kuroiwa, T. (1998) Three-dimensional analysis of the senescence program in rice (Oryza sativa L.) coleoptiles: investigations by fluorescence microscopy and electron microscopy. Planta, 206 585-97.
- James, F., Brouquisse, R., Pradet, A. and Raymond, P. (1993) Changes in proteolytic activities in glucose-starved maize root tips: regulation by sugars. Plant Physiol. Biochem., 31 845-56.
- James, F., Brouquisse, R., Suire, C., Pradet, A. and Raymond, P. (1996) Purification and biochemical characterization of a vacuolar serine endopeptidase induced by glucose starvation in maize roots. Biochem. J., 320 283-92.
- Journet, E.-P., Bligny, R. and Douce, R. (1986) Biochemical changes during sucrose deprivation in higher plant cells. J. Biol. Chem., 261 3193-99.
- Keijzer, C.J., Reinders, M.C. and Klooster, H.B.L.-T. (1996) The mechanics of the grass flower: the extension of the staminal filaments and the lodicules of maize. Ann. Bot., 77 675-83.
- Levanony, H., Rubin, R., Altschuler, Y. and Galili, G. (1992) Evidence for a novel route of wheat storage proteins to vacuoles. J. Cell Biol., 119 1117-28.
- Liou, W., Geuze, H.J., Geelen, M.J.H. and Slot, J.W. (1997) The autophagic and endocytic pathways converge at the nascent autophagic vacuoles. J. Cell Biol., 136 61-70.
- Löffler, A., Abel, S., Jost, W., Beintema, J.J. and Glund, K. (1992) Phosphate-regulated induction of intracellular ribonucleases in cultured tomato (Lycopersicon esculentum) cells. Plant Physiol., 98 1472-78.
- Maeshima, M., Hara-Nishimura, I., Takeuchi, Y. and Nishimura, M. (1994) Accumulation of vacuolar H+-pyrophosphatase and H+-ATPase during reformation of the central vacuole in germinating pumpkin seeds. Plant Physiol., 106 61-69.
- Marty, F. (1978) Cytochemical studies on GERL, provacuoles and vacuoles in root meristematic cells of Euphorbia . Proc. Natl. Acad. Sci. USA, 75 852-56.
- Marty, F. (1997) The biogenesis of vacuoles: insights from microscopy. Adv. Bot. Res., 25 1-42.
- Marty, F. (1999) Plant vacuoles. Plant Cell, 11 587-99.
- Marty, F., Branton, D. and Leigh, R.A. (1980) Plant vacuoles, in The Biochemistry of Plants, Vol. 1, pp. 625-58.
-
Matile, P. (1975) The Lytic Compartment of Plant Cells, Cell Biology Monographs, Vol. 1, Springer-Verlag, Wien.
10.1007/978-3-7091-8399-1 Google Scholar
- Matile, P. (1997) The vacuole and cell senescence. Adv. Bot. Res., 25 87-112.
- Matile, P. and Winkenbach, F. (1971) Function of lysosomes and lysosomal enzymes in the senescing corolla of the morning glory (Ipomoea purpurea). J. Exp. Bot., 22 759-71.
- Melroy, D.L. and Herman, E.M. (1991) TIP, an integral membrane protein of the protein-storage vacuoles of the soybean cotyledon undergoes developmentally regulated membrane accumulation and removal. Planta, 184 113-22.
- Minami, A. and Fukuda, H. (1995) Transient and specific expression of a cysteine endopeptidase associated with autolysis during differentiation of Zinnia mesophyll cells into tracheary elements. Plant Cell Physiol., 36 1599-606.
- Monroe, J.D., Salminen, M.D. and Preiss, J. (1991) Nucleotide sequence of a cDNA clone encoding β-amylase from Arabidopsis thaliana . Plant Physiol., 97 1599-601.
- Moriyasu, Y. (1995) Examination of the contribution of vacuolar proteases to intracellular protein degradation in Chara corallina . Plant Physiol., 109 1309-15.
- Moriyasu, Y. and Ohsumi, Y. (1996) Autophagy in tobacco suspension-cultured cells in response to sucrose starvation. Plant Physiol., 111 1233-41.
- Mortimore, G.E. and Schworer, C.M. (1977) Induction of autophagy by amino-acid deprivation in perfused rat liver. Nature, 270 174-76.
- Poux, N. (1963) Sur la présence dénclaves cytoplasmiques in voie de dégénerescence dans les vacuoles des cellulles végétales. C. R. Acad. Sci. (Paris), 257 736-38.
- Rébeillé, F., Bligny, R., Martin, J.-B. and Douce, R. (1985) Effect of sucrose starvation on sycamore (Acer pseudoplatanus) cell carbohydrate and Pi status. Biochem. J., 226 679-84.
- Record, R.D. and Griffing, L.R. (1988) Convergence of the endocytic and lysosomal pathways in soybean protoplasts. Planta, 176 425-32.
- Robinson, D.G., Hoh, B., Hinz, G. and Jeong, B.-K. (1995) One vacuole or two vacuoles: do protein storage vacuoles arise de novo during pea cotyledon development? J. Plant Physiol., 145 654-64.
- Robinson, D.G., Galili, G., Herman, E.M. and Hillmer, S. (1998) Topical aspects of vacuolar protein transport: autophagy and prevacuolar compartments. J. Exp. Bot., 49 1263-70.
- Roby, C., Martin, J.-B., Bligny, R. and Douce, R. (1987) Biochemical changes during sucrose deprivation in higher plant cells: phosphorus-31 nuclear magnetic resonance studies. J. Biol. Chem., 262 5000-5007.
- Sakai, Y., Koller, A., Rangell, L.K., Keller, G.A. and Subramani, S. (1998) Peroxisome degradation by microautophagy in Pichia pastoris: identification of specific steps and morphological intermediates. J. Cell. Biol., 141 625-36.
- Schworer, C.M. and Mortimore, G.E. (1979) Glucagon-induced autophagy and proteolysis in rat liver: mediation by selective deprivation of intracellular amino acids. Proc. Natl. Acad. Sci. USA, 76 3169-73.
- Seglen, P.O. and Bohley, P. (1992) Autophagy and other vacuolar protein degradation mechanisms. Experientia, 48 158-72.
- Sikora, A., Hillmer, S. and Robinson, D.G. (1998) Sucrose starvation causes a loss of immunologically detectable pyrophosphatase and V-ATPase in the tonoplast of suspension-cultured tobacco cells. J. Plant Physiol., 152 207-12.
- Smith, M.T., Saks, Y. and Van Staden, J. (1992) Ultrastructural changes in the petals of senescing flowers of Dianthus caryophyllus L. Ann. Bot., 69 277-85.
- Swanson, S.J., Bethke, P.C. and Jones, R.L. (1998) Barley aleurone cells contain two types of vacuoles: characterization of lytic organelles by use of fluorescent probes. Plant Cell, 10 685-98.
- Takeshige, K., Baba, M., Tsuboi, S., Noda, T. and Ohsumi, Y. (1992) Autophagy in yeast demonstrated with proteinase-deficient mutants and conditions for its induction. J. Cell Biol., 119 301-11.
- Tranbarger, T.J., Franceschi, V.R., Hildebrand, D.F. and Grimes, H.D. (1991) The soybean 94 kilodalton vegetative storage protein is a lipoxygenase that is localized in paraveinal mesophyll cell vacuoles. Plant Cell, 3 973-87.
- Tuttle, D.L., Lewin, A.S. and Dunn, Jr. W.A. (1993) Selective autophagy of peroxisomes in methylotrophic yeasts. Eur. J. Cell Biol., 60 283-90.
- Van der Wilden, W., Herman, E.M. and Chrispeels, M.J. (1980) Protein bodies of mung bean cotyledons as autophagic organelles. Proc. Natl. Acad. Sci. USA, 77 428-32.
- Vaughn, K.C. and Duke, S.O. (1981) Evaginations from the plastid envelope: a method for transfer of substances from plastid to vacuole. Cytobios., 32 89-95.
- Vigil, E.L. (1970) Cytochemical and developmental changes in microbodies (glyoxysomes) and related organelles of castor bean endosperm. J. Cell Biol., 46 435-54.
- Villiers, T.A. (1967) Cytolysomes in long-dormant plant embryo cells. Nature, 214 1356-57.
- Villiers, T.A. (1971) Lysosomal activities of the vacuole in damaged and recovering plant cells. Nature New Biol., 233 57-58.
- Wu, J., Lightner, J., Warwick, N. and Browse, J. (1997) Low-temperature damage and subsequent recovery of fab1 mutant Arabidopsis exposed to 2 °C. Plant Physiol., 113 347-56.
- Yu, S.-M. (1999) Cellular and genetic responses of plants to sugar starvation. Plant Physiol., 121 687-93.
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