Fast dynamic 3D MR spectroscopic imaging with compressed sensing and multiband excitation pulses for hyperpolarized 13C studies
Corresponding Author
Peder E. Z. Larson
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Byers Hall, Suite 102, 1700 4th St, San Francisco, CA 94158===Search for more papers by this authorSimon Hu
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorMichael Lustig
Department of Electrical Engineering and Computer Science, University of California - Berkeley, Berkeley, California, USA
Search for more papers by this authorAdam B. Kerr
Department of Electrical Engineering, Magnetic Resonance Systems Research Laboratory, Stanford University, Stanford, California, USA
Search for more papers by this authorSarah J. Nelson
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorJohn Kurhanewicz
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorJohn M. Pauly
Department of Electrical Engineering, Magnetic Resonance Systems Research Laboratory, Stanford University, Stanford, California, USA
Search for more papers by this authorDaniel B. Vigneron
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorCorresponding Author
Peder E. Z. Larson
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Byers Hall, Suite 102, 1700 4th St, San Francisco, CA 94158===Search for more papers by this authorSimon Hu
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorMichael Lustig
Department of Electrical Engineering and Computer Science, University of California - Berkeley, Berkeley, California, USA
Search for more papers by this authorAdam B. Kerr
Department of Electrical Engineering, Magnetic Resonance Systems Research Laboratory, Stanford University, Stanford, California, USA
Search for more papers by this authorSarah J. Nelson
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorJohn Kurhanewicz
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorJohn M. Pauly
Department of Electrical Engineering, Magnetic Resonance Systems Research Laboratory, Stanford University, Stanford, California, USA
Search for more papers by this authorDaniel B. Vigneron
Department of Radiology and Biomedical Imaging, University of California - San Francisco, San Francisco, California, USA
Search for more papers by this authorAbstract
Hyperpolarized 13C MR spectroscopic imaging can detect not only the uptake of the pre-polarized molecule but also its metabolic products in vivo, thus providing a powerful new method to study cellular metabolism. Imaging the dynamic perfusion and conversion of these metabolites provides additional tissue information but requires methods for efficient hyperpolarization usage and rapid acquisitions. In this work, we have developed a time-resolved 3D MR spectroscopic imaging method for acquiring hyperpolarized 13C data by combining compressed sensing methods for acceleration and multiband excitation pulses to efficiently use the magnetization. This method achieved a 2 sec temporal resolution with full volumetric coverage of a mouse, and metabolites were observed for up to 60 sec following injection of hyperpolarized [1-13C]-pyruvate. The compressed sensing acquisition used random phase encode gradient blips to create a novel random undersampling pattern tailored to dynamic MR spectroscopic imaging with sampling incoherency in four (time, frequency, and two spatial) dimensions. The reconstruction was also tailored to dynamic MR spectroscopic imaging by applying a temporal wavelet sparsifying transform to exploit the inherent temporal sparsity. Customized multiband excitation pulses were designed with a lower flip angle for the [1-13C]-pyruvate substrate given its higher concentration than its metabolic products ([1-13C]-lactate and [1-13C]-alanine), thus using less hyperpolarization per excitation. This approach has enabled the monitoring of perfusion and uptake of the pyruvate, and the conversion dynamics to lactate and alanine throughout a volume with high spatial and temporal resolution. Magn Reson Med, 2011. © 2010 Wiley-Liss, Inc.
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