Volume 56, Issue 11 pp. 2846-2860
Review

Electron Cryo-microscopy as a Tool for Structure-Based Drug Development

Felipe Merino

Felipe Merino

Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany

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Stefan Raunser

Corresponding Author

Stefan Raunser

Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, 44227 Dortmund, Germany

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First published: 10 November 2016
Citations: 40

Graphical Abstract

Cold as ice: A new generation of detectors has revolutionized electron cryo-microscopy (Cryo-EM). This review summarizes the use of cryo-EM to study the structure of pharmacologically relevant macromolecules that have escaped classical techniques. In many of these cases, drug-like molecules have been identified, thus validating cryo-EM as a useful tool for structure-based drug design.

Abstract

For decades, X-ray crystallography and NMR have been the most important techniques for studying the atomic structure of macromolecules. However, as a result of size, instability, low yield, and other factors, many macromolecules are difficult to crystallize or unsuitable for NMR studies. Electron cryo-microscopy (cryo-EM) does not depend on crystals and has therefore been the method of choice for many macromolecular complexes that cannot be crystallized, but atomic resolution has mostly been beyond its reach. A new generation of detectors that are capable of sensing directly the incident electrons has recently revolutionized the field, with structures of macromolecules now routinely being solved to near-atomic resolution. In this review, we summarize some of the most recent examples of high-resolution cryo-EM structures. We put particular emphasis on proteins with pharmacological relevance that have traditionally been inaccessible to crystallography. Furthermore, we discuss examples where interactions with small molecules have been fully characterized at atomic resolution. Finally, we stress the current limits of cryo-EM, and methodological issues related to its usage as a tool for drug development.

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