Amicyanin and Complexes of Amicyanin with Methylamine Dehydrogenase and Cytochrome c551i
F Scott Mathews
Washington University School of Medicine, St. Louis, MO, USA
Search for more papers by this authorF Scott Mathews
Washington University School of Medicine, St. Louis, MO, USA
Search for more papers by this authorAbstract
Amicyanin is the key component of a soluble periplasmic electron transfer chain in the bacterium Paracoccus denitrificans that passes electrons from an amine substrate to a terminal oxidase in the periplasmic membrane. It directly and specifically transfers electrons from methylamine dehydrogenase (MADH) to an inducible c-type cytochrome, c551i. Amicyanin is a 12.5-kDa monomeric cupredoxin, MADH is a 124-kDa heterotetramer oxidizing enzyme, and c551i is a 17.5-kDa monomeric cytochrome. Crystal structures of amicyanin, a binary MADH–amicyanin complex and a ternary MADH–amicyanin–cytochrome c551i complex, are described and correlated with their kinetic and electron transfer properties in solution.
3D Structure
Ribbon diagram of AMI viewed down the central axis of the β-sandwich. The colors of the nine β-strands progress from strand 1 on the left in blue to strand 9 at the upper right in red. The four ligands to the copper atom in the upper right are also shown. This diagram was made with MOLSCRIPT21 and RASTER3D.22 PDB code: 1AAC
References
- 1 RMJ van Spanning, CS Wansel, WNM Reijnders, LF Oltmann and AH Stouthamer, FEBS Lett, 275, 217–20 (1990).
- 2 M Husain and VL Davidson, J Bacteriol, 169, 1712–7 (1987).
- 3 M Husain and VL Davidson, J Biol Chem, 261, 8577–80 (1986).
- 4 RMJ van Spanning, CW Wansell, T de Boer, MJ Hazelaar, H Anazawa, N Harms, LF Oltmann and AH Stouthamer, J Bacteriol, 173, 6948–61 (1991).
- 5
C Anthony,
The Biochemistry of Methylotrophs,
Academic Press,
New York,
(1982).
10.4319/lo.2006.51.6.2527 Google Scholar
- 6 VL Davidson and MA Kumar, FEBS Lett, 245, 271–3 (1989).
- 7 RP Ambler and J Tobari, Biochem J, 232, 451–7 (1985).
- 8 J van Beeumen, S van Bun, GW Canters, A Lommen and C Chothia, J Biol Chem, 266, 4869–77 (1991).
- 9 PR Alefounder and SJ Ferguson, Biochem Biophys Res Commun, 98, 778–85 (1981).
- 10 M Husain and VL Davidson, J Biol Chem, 260, 14626–9 (1985).
- 11 VL Davidson, Methods Enzymol, 188, 241–6 (1990).
- 12 VL Davidson, LH Jones, E Graichen, ES Mathews and JP Hostler, Biochemistry, 36, 12733–8 (1997).
- 13 E Graichen, LH Jones, B Sharma, RJM van Spanning, JP Hostler and VL Davidson, J Bacteriol, 181, 4216–22 (1999).
- 14 AY Chistoserdov, GD Boyd, FS Mathews and ME Lidstrom, Biochem Biophys Res Commun, 184, 1181–9 (1992).
- 15 L Chen, M Doi, RCE Durley, AY Chistoserdov, ME Lidstrom, VL Davidson and FS Mathews, J Mol Biol, 276, 131–49 (1997).
- 16 KA Gray, DB Knaff, M Hussain and VL Davidson, FEBS Lett, 207, 239–42 (1986).
- 17 M Husain, VL Davidson and AJ Smith, Biochemistry, 25, 2431–6 (1986).
- 18 WS McIntire, DE Wemmer, AY Chistoserdov and ME Lidstrom, Science, 252, 817–24 (1991).
- 19 L Chen, FS Mathews, VL Davidson, EG Huizinga, FM Vellieux and WG Hol, Proteins, 14, 288–99 (1992).
- 20 M Husain, VL Davidson, KA Gray and DB Knaff, Biochemistry, 26, 4139–43 (1987).
- 21 P Kraulis, J Appl Crystallog, 24, 946–50 (1991).
- 22 EA Merritt and MEP Murphy, Acta Cryst, D50, 946–50 (1994).
- 23 LW Lim, FS Mathews, M Husain and VL Davidson, J Mol Biol, 189, 257–8 (1986).
- 24 RCE Durley, L Chen, LW Lim, FS Mathews and VL Davidson, Protein Sci, 2, 739–52 (1993).
- 25 LM Cunane, ZW Chen, RCE Durley and FS Mathews, Acta Cryst, D52, 676–86 (1996).
- 26 A Romero, H Nar, R Huber, A Messerschmidt, AP Kalverda, GW Canters, RCE Durley and FS Mathews, J Mol Biol, 236, 1196–211 (1994).
- 27 L Chen, L Lim, FS Mathews, VL Davidson and M Husain, J Mol Biol, 203, 1137–8 (1988).
- 28 FMD Vellieux, KH Kalk, J Drenth and WGJ Hol, Acta Cryst, B46, 806–23 (1990).
- 29 L Chen, RCE Durley, BJ Poliks, K Hamada, ZW Chen, FS Mathews, VL Davidson, Y Satow, E Huizinga, FMD Vellieux and WGJ Hol, Biochemistry, 31, 4959–64 (1992).
- 30 L Chen, FS Mathews, VL Davidson, M Tegoni, C Rivetti and GL Rossi, Protein Sci, 2, 147–54 (1993).
- 31 L Chen, RCE Durley, FS Mathews and VL Davidson, Science, 264, 86–90 (1994).
- 32 KD Sharma, TM Loehr, J Sanders-Loehr, M Husain and VL Davidson, J Biol Chem, 263, 3303–6 (1988).
- 33 A Lommen, GW Canters and J van Beeumen, Eur J Biochem, 176, 213–23 (1988).
- 34 T Inoue, H Sugawara, S Hamanaka, H Tsukui, E Suzuki, T Kohzuma and Y Kai, Biochemistry, 38, 6063–9 (1999).
- 35 T Inoue, N Nishio, Y Kai, S Harada, Y Ohshiro, S Suzuki, T Kohzuma, S Shidara and H Iwasaki, J Biochem (Tokyo), 114, 761–5 (1993).
- 36 L Holm and C Sander, Science, 273, 595–603 (1996).
- 37 ZM Chen, MJ Barber, WS McIntire and FS Mathews, Acta Cryst, D54, 253–8 (1998).
- 38 FS Mathews, Prog Biophys Molec Biol, 45, 1–45 (1985).
- 39 Z Zhu and VL Davidson, J Biol Chem, 273, 14254–60 (1998).
- 40 Z Zhu, LM Cunane, ZW Chen, RCE Durley, FS Mathews and VL Davidson, Biochemistry, 37, 17128–36 (1998).
- 41 HB Brooks, LH Jones and VL Davidson, Biochemistry, 32, 2725–9 (1993).
- 42 VL Davidson and LH Jones, Anal Chim Acta, 249, 235–40 (1991).
- 43 HB Brooks and VL Davidson, Biochemistry, 33, 5696–701 (1994).
- 44 RA Marcus and N Sutton, Biochim Biophys Acta, 811, 265–322 (1985).
- 45 GR Bishop and VL Davidson, Biochemistry, 34, 12082–6 (1995).
- 46 K Warneke, HB Brooks, GT Babcock, VL Davidson and JL McCracken, JACS, 115, 6864–5 (1993).
- 47 GR Bishop, HB Brooks and VL Davidson, Biochemistry, 35, 8948–54 (1996).
- 48 VL Davidson and LH Jones, J Biol Chem, 270, 23941–3 (1995).
- 49 VL Davidson and LH Jones, Biochemistry, 35, 8120–5 (1996).
- 50 KA Gray, VL Davidson and KB Knaff, J Biol Chem, 263, 13987–90 (1988).
- 51 MA Kumar and VL Davidson, Biochemistry, 29, 5299–304 (1990).
- 52 A Merli, DE Broderson, B Morini, ZW Chen, RCE Durley, FS Mathews, VL Davidson and GL Rossi, J Biol Chem, 271, 9177–80 (1996).
- 53 JJ Regan, SM Risser, DN Beratan and JN Onuchic, J Chem Phys, 97, 13083–8 (1993).