Volume 56, Issue 4 pp. 1038-1045
research papers
Open Access

Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography

Mohammad Vakili

Corresponding Author

Mohammad Vakili

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

Mohammad Vakili, e-mail: [email protected]; Huijong Han, e-mail: [email protected]; Joachim Schulz, e-mail: [email protected]Search for more papers by this author
Huijong Han

Corresponding Author

Huijong Han

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

Mohammad Vakili, e-mail: [email protected]; Huijong Han, e-mail: [email protected]; Joachim Schulz, e-mail: [email protected]Search for more papers by this author
Christina Schmidt

Christina Schmidt

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Agnieszka Wrona

Agnieszka Wrona

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Marco Kloos

Marco Kloos

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Iñaki de Diego

Iñaki de Diego

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Katerina Dörner

Katerina Dörner

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Tian Geng

Tian Geng

Sosei Heptares, Steinmetz Building, Granta Park, Great Abington, Cambridge, CB21 6DG United Kingdom

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Chan Kim

Chan Kim

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Faisal H. M. Koua

Faisal H. M. Koua

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Diogo V. M. Melo

Diogo V. M. Melo

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Mathieu Rappas

Mathieu Rappas

Sosei Heptares, Steinmetz Building, Granta Park, Great Abington, Cambridge, CB21 6DG United Kingdom

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Adam Round

Adam Round

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Ekaterina Round

Ekaterina Round

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Marcin Sikorski

Marcin Sikorski

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Joana Valerio

Joana Valerio

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Tiankun Zhou

Tiankun Zhou

Diamond Light Source, Harwell Science and Innovation Campus, Didcot, OX11 0DE United Kingdom

Rutherford Appleton Laboratory, Research Complex at Harwell, Didcot, OX11 0QX United Kingdom

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Kristina Lorenzen

Kristina Lorenzen

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

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Joachim Schulz

Corresponding Author

Joachim Schulz

European XFEL GmbH, Holzkoppel 4, Schenefeld, 22869 Germany

Mohammad Vakili, e-mail: [email protected]; Huijong Han, e-mail: [email protected]; Joachim Schulz, e-mail: [email protected]Search for more papers by this author
First published: 12 June 2023

Abstract

Time-resolved crystallography enables the visualization of protein molecular motion during a reaction. Although light is often used to initiate reactions in time-resolved crystallography, only a small number of proteins can be activated by light. However, many biological reactions can be triggered by the interaction between proteins and ligands. The sample delivery method presented here uses a mix-and-extrude approach based on 3D-printed microchannels in conjunction with a micronozzle. The diffusive mixing enables the study of the dynamics of samples in viscous media. The device design allows mixing of the ligands and protein crystals in 2 to 20 s. The device characterization using a model system (fluorescence quenching of iq-mEmerald proteins by copper ions) demonstrated that ligand and protein crystals, each within lipidic cubic phase, can be mixed efficiently. The potential of this approach for time-resolved membrane protein crystallography to support the development of new drugs is discussed.

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