Genotoxic effects in the Eastern mudminnow (Umbra pygmaea) after prolonged exposure to River Rhine water, as assessed by use of the in vivo SCE and Comet assays
Abstract
The production of drinking water from river water requires a certain minimal river water quality. The Association of River Rhine Water Works (RIWA), therefore, operates a monitoring network. In vitro mutagenicity studies have shown that the genotoxicity of the River Rhine water steadily decreased from 1981 until 2001. Compared to a study in 1978, a decrease in genotoxicity was also observed in an in vivo genotoxicity study in 2005, in which Eastern mudminnows (Umbra pygmaea) were exposed to River Rhine water, and gill cells were used for the Sister Chromatid Exchange (SCE) test and the Comet assay. In this 2005 study, the in vivo genotoxicity increased upon extending exposure of the fish from 3 to 11 days. Therefore, the objectives of this study were to investigate (i) whether new data corroborate that in vivo genotoxicity of River Rhine water is at present lower than in 1978, (ii) whether the Comet assay is a suitable alternative to the SCE assay, and (iii) whether further prolonged exposure results in a further increase in in vivo genotoxicity. The new data corroborate that in vivo genotoxicity of River Rhine water is at present lower than in 1978. The Comet assay is a useful addition but does not provide a substitute for the SCE endpoint in these in vivo genotoxicity studies. Prolonging the exposure time of Eastern mudminnows to River Rhine water from 11 to 42 days did not give a significant increase in SCEs and DNA damage (Comet assay) in gill cells. Mol. Mutagen. 2012. © 2012 Wiley Periodicals, Inc.
INTRODUCTION
The production of drinking water from river water requires a certain minimal river water quality. The Association of Rhine Water Works (RIWA) operates a monitoring network to obtain information about this water quality. Next to frequent analytical chemical analyses, which provide direct information about the level of organics or other chemical impurities present in the surface water, genotoxicity studies have also been incorporated in this network of test batteries. In 1978, it was shown that fish exposed to River Rhine water developed chromosome aberrations in their gill cells [Alink et al.,1980]. In the period from 1981 to 2001, the in vitro Ames test was used to monitor the genotoxicity of the River Rhine water. A decline of genotoxicity in River Rhine water was shown (from a maximum level of 600–700 revertants per liter in 1981 to 200–300 revertants per liter in 2001 using concentrated water samples) [Hoogenboezem and Penders,2003]. To monitor the genotoxicity in vertebrate cells, a study was presented in 2005 on the in vivo genotoxicity of River Rhine water using the gill cells of the Eastern mudminnows, the Sister Chromatid Exchange (SCE) test, and the Comet assay [Alink et al.,2007]. The latter test was used for the first time for genotoxicity monitoring in the Eastern mudminnows. The main conclusion of this study was that unconcentrated River Rhine water still contains genotoxins that are able to induce SCEs and DNA damage, the latter as measured with the Comet assay, in gill cells of fish that were exposed for 11 days to River Rhine water. After 3 days of exposure, no effect was seen on SCE frequency, and a slight, but not significant increase of DNA damage was seen in the Comet assay. This suggests a dose- and/or time-dependent increase in in vivo genotoxicity upon prolonged exposure. Such an increase in in vivo genotoxicity up in prolonged exposure to genotoxic compounds may pose a risk for environmental species as well as for humans who are exposed to drinking water prepared from surface water. In that case, extra purifications steps may be required to reduce this risk. The consequences of prolonged exposure to organics present in low concentrations can be studied using a fish model with a long-term exposure time. In this study, the Eastern mudminnow (Umbra pygmaea) was used, from which exposed gill cells were studied with the SCE test and the single-cell gel electrophoresis assay (Comet assay). In our previous study, an increase in in vivo genotoxicity was observed in this model system when exposure time was increased from 3 to 11 days. In this study, the effect of extending the exposure from 11 to 42 days was investigated. Altogether, the aims of this study were to investigate (i) whether the new in vivo genotoxicity data obtained would corroborate the conclusion from the 2005 study that in vivo genotoxicity of River Rhine water is at present lower than that detected in 1978, (ii) whether the Comet assay would provide a suitable alternative or addition to the SCE assay as an in vivo endpoint, and (iii) whether prolonged exposure from 11 to 42 days would result in a further increase in genotoxicity.
Eastern mudminnows were exposed to River Rhine water for 11 and 42 days in flow-through aquaria, and gill cells were used for the SCE test and the Comet assay.
MATERIALS AND METHODS
Chemicals
All chemicals were of proanalysis quality. Ethyl methanesulphonate (EMS) was obtained from Fluka (Buchs, Switserland). Sodium N-lauroylsarcosine, collagenase, bovine serum albumin (BSA), phosphate-buffered saline (PBS), normal melting point agarose (NMP), low-melting point agarose (LMP), HEPES, ethidium bromide, bromodeoxyuridine (BrdU), colchicine, Hoechst 33528, and Giemsa were obtained from Sigma-Aldrich (Zwijndrecht, The Netherlands). Potassium chloride (KCl), sodium chloride (NaCl), acetic acid, EDTA, sodium hydroxide (NaOH), phosphate and citrate salts for buffers, Triton-X-100, methanol, and DMSO were obtained from VWR International B.V. (Amsterdam, The Netherlands). Tris was obtained from Invitrogen (Breda, The Netherlands).
Experimental Setup and Exposure to River Rhine Water
After permission of the Animal Welfare Committee of Wageningen University and in collaboration with the Dutch Forest Service, 90 Eastern mudminnows (Umbra pygmaea) were collected from small ponds in the National Park “De Groote Peel,” a nature reserve near Ospel in The Netherlands. The fish were transported to the intake station for the city of Amsterdam water works “Waternet” at Nieuwegein, located at the River Rhine. To prevent stress, the fish were adapted gradually to the conditions of Rhine water and control water. During a period of 14 days, De Groote Peel water was slowly diluted with River Rhine water or ground water for the control. Fish were fed daily with frozen red mosquito larvae (chironomids) until the end of the exposure.
Fish were exposed to Rhine or control water in the same manner and at the same location as in the previous experiment in 2005 [Alink et al.,2007]. The control water was natural groundwater of drinking-water quality. The groundwater has been retained in deep aquifers for over 100 years, thus considered to be free of contaminants. Before distribution to the community as drinking water, this water is aerated and rapidly filtered through sand without treatment with chlorine or any other disinfectants. This water is ideal as control water due to lack of influence from infiltrating river water. For comparison with previous studies, sodium chloride (NaCl) was added at the exposure site to the control water to increase the conductivity to the same level as River Rhine water (∼ 700 μS/cm). The pH of both waters was around 8. There were no other relations between the control water and the Rhine water; thus, the ground water control can be considered as a laboratory blank.
Starting on December 4, 2007, 8 fish for the Comet assay and 12 fish for the SCE test were exposed to Rhine water for 42 days. Starting on January 4, 2008, four fish for the Comet assay and six fish for the SCE test were exposed to Rhine water for 11 days. Two groups of fish, 8 fish for the Comet and 12 fish for the SCE test, were kept in control water for 42 days.
The fish were kept in 100 l all-glass flow-through aquariums (Fig. 1), with a flow rate of 800 l per day and continuous aeration. Silt was removed from the Rhine water, using a sedimentation tank and filtration unit with four serially interconnected cotton candle filters (30, 10, 3, and 1 μm pore size, respectively). Only dissolved substances and substances absorbed to particles smaller than 1 μm are considered to be able to pass through the filters. A temperature of 12°C was maintained by heating the incoming Rhine and control water.

The experimental design for the exposure of Eastern mudminnow fish to River Rhine and control water.
As a positive control, six fish for the SCE test and four fish for the Comet assay were exposed in separate 5 l aquariums to ethyl methanesulfonate (25 mg/l) for 3 days.
Sister Chromatid Exchange Test
The sister chromatid differentiation technique in vivo, as described by Kligerman and Bloom [1976] was used with slight modifications. For the experiments, nine fish were used for the control group, five fish were used for the group with 11 days exposure to River Rhine water, and, for the River Rhine group exposed for 42 days, eight fish were used. All the fish for the SCE test were injected intraperitoneally (i.p.) with 0.5 mg BrdU/g fish and exposed to this DNA base analog for 10 days (two cell cycles). At the end of the exposure period, the fish were injected i.p. with 0.25 mg colchicine/g fish. Ten to twelve hours later, the fish were decapitated, and the gills were removed and placed in a 0.4% hypotonic solution of KCl for 30 min. The tissues were then fixed in a methanol-acetic acid (3:1) solution. Cell preparations were made by the solid-tissue technique [Kligerman and Bloom,1977]. The cells were dried for at least 24 hr and then stained according to a modified fluorescence-plus-Giemsa method [Perry and Wolff,1974]. The preparations were first treated with Hoechst 33528 (50 μg/ml) in Sorensen's buffer (pH 7.0) for 10 min in the dark, rinsed in distilled water, and then exposed to UV radiation (HPW 125 W-T, Philips, Belgium) for 4 hr in a phosphate-citrate buffer (pH 7.0). Subsequently, the preparations were heated in 2× saline-sodium citrate buffer at 60°C for 40 min and stained in 5% Giemsa in Sorensen's buffer (pH 6.8) for 10 min. The preparations were dried for at least 48 hr, and the SCEs were scored. Scoring was done in a double-blind fashion.
Comet Assay
The alkaline Comet assay was a modification according to a procedure described for zebrafish (Danio rerio) [Schnurstein and Braunbeck,2001] of the standard method for zebra mussels (Dreissena polymorpha) [Osman et al.,2004]. After the exposure period, four fish were decapitated. For the Comet assay, the number of fish used was according to the recommendation described by Hartmann et al. [2003]. The gills of the fish and, subsequently, the cell suspensions and comet slides were kept away from strong lights to avoid photolysis. The gills were removed and placed in cold PBS buffer with 5 mM HEPES and 0.65 mM EDTA. A cell suspension of the gills was obtained by treatment with a collagenase solution for 15 min. After filtration (150-μm pore size) and centrifugation (2,000 rpm, 5°C, 5 min), the pellet was resuspended in cold PBS buffer with 5 mM HEPES, 0.65 mM EDTA, and 0.1% BSA. The cell suspension was mixed with 1% LMP agarose (37°C) and transferred to a slide precoated with 1% NMP agarose. A top layer of LMP agarose (1:1 diluted with PBS and 0.1% BSA) was added to the slide to fill in any residual holes in the second agarose layer. Per fish four slides were prepared.
The slides were placed for at least 1 hr in cold lysis buffer (2.5 M NaCl, 0.1 M EDTA, 0.01 M Tris, 1% sodium N-lauroylsarcosine, 1% Triton-X-100, and 10% DMSO, pH 10). To produce single-stranded DNA, the slides were placed on a horizontal electrophoresis unit and covered with electrophoresis buffer (0.3 M NaOH, 1 mM EDTA, and pH 13). After 30-min incubation time, electrophoresis was performed for 20 min at 25 V and 400 mA (Hoeffer Supersub, Pharmacia biotech). Subsequently, the slides were rinsed using neutralization buffer (0.4 M Tris, pH 7.5, and 5 min), and agarose gels were dehydrated by immersing the slides in absolute ethanol for 1–2 min. The DNA was stained for 10 min using ethidium bromide solution (20 μg/ml). The equipment used for scoring was an Olympus BH-2 fluorescence microscope (excitation wavelength 515–560 nm) with image-analysis software Comet II (Perceptive Instruments, Haverhill, UK). The software provides information about the Comet like tail length, percentage DNA in tail, and tail moment (product of the tail length and the fraction of total DNA in the tail). When very low levels of DNA damage are present, tail length is most informative [Collins et al.,2008]. Per slide, the tail length of 50 comets was measured. Scoring was done in a double-blind fashion.
Chemical Analysis
The chemical analysis of water samples from the sampling location Nieuwegein was performed at Het Waterlaboratorium, Haarlem, the Netherlands. Using solid-phase extraction, HPLC, and GCMS, a large array of organics and other micropollutants were measured. Specific information about the performed analysis can be obtained from the RIWA Annual Reports 2007 and 2008, available at www.riwa.org under Publications or from the first author.
Statistics
Mean values and standard errors of SCEs and tail lengths were determined. Each fish was considered as a test unit as described by others [Tice et al.,2000; Hartmann et al.,2003]. Within each test, the differences between groups were studied using the Student's t-test with significance levels at P < 0.05.
RESULTS
Water Conditions
The temperature of the water in both groups (control and Rhine group) was adjusted to 12°C during the exposure time (Fig. 2). The conductivity of the water for the control group was adjusted frequently depending on the change in conductivity of the River Rhine water. The conductivity of the River Rhine water decreased with increasing discharge of the River Rhine. The pH value remained constant over the entire period. The total hardness of the control water was 202 mg/l CaCO3. The control water has been monitored for chemical contamination during the exposure period. The chemicals analyzed in control water in this study were all below the detection limits (data not presented).

Flow rate and pH of the River Rhine water during exposure. Controlled temperature and conductivity of Rhine and Control group during different exposure periods (bars).
Physical Chemical Quality Parameters of River Rhine Water
The general physical chemical quality parameters of the River Rhine water in December 2007 and January 2008 are presented in Table I together with annual means of 2007 and 2008.
December 2007 | Annual mean 2007 (n = 13) | January 2008 | Annual mean 2008 (n = 13) | |
---|---|---|---|---|
Temperature (°C) | 2.1 | 13.2 | 8.1 | 13.2 |
Oxygen (mg/l) | 12.3 | 9.45 | 12 | 9.63 |
Turbidity (FTE) | 36 | 30.7 | 40 | 23 |
Suspended solids (mg/l) | 32 | 24.7 | 23.1 | 28.4 |
Total hardness (mg/l CaCO3) | 197 | 219 | 240 | 221 |
Total organic carbon (mg/l) | 4.2 | 3.53 | 3.3 | 3.12 |
Biological oxygen demand (mg/l) | <1 | <1 | NA | 1.52 |
Chemical oxygen demand (mg/l) | 15 | 12.8 | NA | 9.75 |
- NA, not available; number, annual mean (n = 4).
In addition to the regular chemical analyses within the framework of the RIWA monitoring program, additional analyses were conducted under the surveillance screening program in operation at the Nieuwegein intake for drinking water production. A selected set of results for quantification of organics from this program is presented in Table II, in which the reporting level is 0.010 μg/l. As far as the analyzed compounds are concerned, no significant change in the overall water quality between the 42 days exposure group and the 11 days exposure group was observed. Table II also indicates which compounds analyzed are compounds listed as carcinogenic or mutagenic [Anonymous,2011] as well as which compounds are listed as carcinogenic, genotoxic, or reprotoxic [Pflaumbaum,2010]. From this, it follows that River Rhine water used for the study contains a variety of compounds of concern because of genotoxicity albeit in low concentrations.
Compound name | CAS-number | Period 42 days | Period 11 days | Increase/Decrease | ||
---|---|---|---|---|---|---|
Average concentration (μg/l) | Number of data | Average concentration (μg/l) | Number of data | |||
o-Xylene | 95-47-6 | 0.028 | 3 | 0.016 | 1 | - |
m- and p-Xylene | 108-38-3 and 106-42-3 | 0.040 | 3 | 0.027 | 1 | - |
1,3,5-Trimethyl benzene | 108-67-8 | 0.010 | 3 | 0.016 | 1 | + |
2-Methylaniline1,2 and 4-methylaniline2 | 95-53-4 and 106-49-0 | 0.013 | 3 | 0.000 | 1 | - |
2-(Benzenesulfonyl)aniline | 4273-98-7 | 0.010 | 3 | 0.000 | 1 | - |
Aminomethylphosphonic acid | 1066-51-9 | 0.268 | 4 | 0.270 | 1 | + |
Aniline2 | 62-53-3 | 0.059 | 3 | 0.075 | 1 | + |
Adsorbable organic halogens | 12.5 | 3 | 11.6 | 1 | - | |
Benzene1,2 | 71-43-2 | 0.038 | 3 | 0.000 | 1 | - |
Bromacil | 314-40-9 | 0.010 | 2 | 0.011 | 1 | + |
Carbamazepine | 298-46-4 | 0.036 | 14 | 0.026 | 4 | - |
3-(3-Chloro-4-methyl-phenyl)-1,1-dimethyl-urea (chlorotoluron)1,2 | 15545-48-9 | 0.035 | 14 | 0.012 | 4 | - |
2-[2-[(2,6-Dichlorophenyl)amino]phenyl]acetic acid (dichlofenac) | 15307-86-5 | 0.044 | 2 | 0.058 | 1 | + |
Dichloromethane2 | 75-09-2 | 0.011 | 3 | 0.023 | 1 | + |
1-Methoxy-2-(2-methoxyethoxy)ethane (diglyme) | 70992-86-8 | 0.128 | 2 | 0.173 | 1 | + |
2-[2-[2-(Bis(carboxymethyl)amino)ethyl-(carboxymethyl)amino]ethyl-(carboxymethyl)amino]acetic acid (DTPA) | 67-43-6 | 5.197 | 2 | 8.050 | 1 | + |
Dipotassium 2-[2-(carboxylatomethyl-(carboxymethyl)amino)ethyl-(carboxymethyl)amino]acetate (EDTA) | 60-00-4 | 5.233 | 2 | 6.475 | 1 | + |
Ethenylbenzene | 100-42-5 | 0.009 | 3 | 0.014 | 1 | + |
Ethylbenzene | 100-41-4 | 0.027 | 3 | 0.000 | 1 | - |
Sodium 2-[(hydroxy-oxido-phosphoryl)methylamino]acetic acid (glyphosate) | 1071-83-6 | 0.058 | 4 | 0.080 | 1 | + |
N2,N2,N4,N4,N6,N6-Hexakis(methoxymethyl)-1,3,5-triazine-2,4,6-triamine (HMMM) | 3089-11-0 | 0.417 | 12 | 0.412 | 3 | - |
Sodium 2-[4-(2-methylpropyl)phenyl]propanoate (ibuprofen) | 15687-27-1 | 0.022 | 2 | 0.031 | 1 | + |
1,1-Dimethyl-3-(4-propan-2-ylphenyl)urea (isoproturon)2 | 34123-59-6 | 0.094 | 14 | 0.029 | 4 | - |
Toluene1,2 | 108-88-3 | 0.141 | 3 | 0.000 | 1 | - |
2-Methoxy-2-methyl-propane (MTBE) | 1634-04-4 | 0.039 | 3 | 0.058 | 1 | + |
2-(Bis(carboxymethyl)amino)acetic acid (NTA) | 139-13-9 | 1.579 | 2 | 2.053 | 1 | + |
Diphenylphosphorylbenzene | 791-28-6 | 0.022 | 12 | 0.014 | 3 | - |
- 1, Compound listed as carcinogenic or mutagenic [Anonymous, 2011].
- 2 Compound listed as carcinogenic, genotoxic, or reprotoxic [Pflaumbaum, 2010].
Sister Chromatid Exchange Test
All fish showed sister chromatid differentiation. As an example, in Figure 3, a metaphase image of a gill cell of the Eastern mudminnow with sister chromatide exchange events is presented. As shown in Figure 4, after 11 days of exposure to River Rhine water, there was a significant increase in the number of SCEs per chromosome compared to the control (P = 0.007). A significant increase in the number of SCEs per chromosome was also present in gill cells of fish exposed to River Rhine water during 42 days compared to the control (P = 0.005). No significant difference in numbers of SCEs was observed between the 11 and 42 days groups (P = 0.92). From this, it was concluded that no increase of SCEs occurred after a further prolonged exposure to River Rhine water.

Metaphase image of a gill cell of the Eastern mudminnow showing two sister chromatide exchange events (see arrows). The fish species has a karyotype with a small number (22) of large metacentric chromosomes.

Number of SCEs per chromosome in gill cells of Eastern mudminnow after exposure of the fish to River Rhine water for 11 and 42 days, control water and EMS; mean ± SEM; n fish, number of fish tested; n chr, number of chromosomes observed; *, significantly different compared to control (P < 0.05).
Comet Assay
Using the trypan blue assay, the viability of the gill-cell suspension varied between 80 and 98% for all fish used. The cell suspensions used were therefore considered acceptable for use in the Comet assay.
As shown in Figure 5, there was a tendency toward an increase in the tail length for the fish exposed to River Rhine water during 11 (P = 0.21) or 42 days (P = 0.43) compared to the groundwater 42 days, but these effects were not statistically significant. No significant difference was found between the 11 and 42 days groups (P = 0.29).

Effect of 11 and 42 days of exposure to River Rhine water on DNA damage in gill cells of the Eastern mudminnow, measured as Comet tail length; mean ± SEM, n = 4. *, significantly different compared to control (P < 0.05).
DISCUSSION
The data of the present study can be compared to those obtained in similar in vivo bioassays performed in 1978 [Alink et al.,1980] and 2005 [Alink et al.,2007]. The 1978 study did not include the Comet assay, whereas the results obtained in 1978 for the SCE test amounted to 0.045 ± 0.012 SCEs/chromosome for the control, 0.128 ± 0.023 SCEs/chromosome upon 3-day exposure, and 0.155 ± 0.021 SCEs/chromosome upon 11-day exposure of the fish to River Rhine water. Comparison of these values to the data of the present study reveals that the 2.8- and 3.4-fold increase in the number of SCEs/chromosome for the 3 and 11-day exposed fish when compared with the control was higher than the 1.4-fold increase now observed for the 2008 water samples upon 42-day exposure and the 1.6-fold increase observed for the 2005 water samples upon 11-day exposure [Alink et al.,2007]. It is concluded that the new data corroborate the conclusion from the 2005 study that in vivo genotoxicity of River Rhine water is at present lower than in 1978.
The Comet assay was applied in this study to compare the results with the SCE test. The Comet assay is a rapid, sensitive, and inexpensive method for measuring DNA strand breaks [Lee and Steinert,2003] and has been used in several environmental studies in organisms living in rivers [Ohe et al.,2004; Whitehead et al.,2004; Keiter et al.,2006; Liney et al.,2006]. Compared to the SCE test, the Comet assay has many advantages, such as being less time-consuming (in the preparations of slides and the microscopic scoring of the DNA damage) and not requiring fish pretreatment with BrdU and colchicine. Because of the lower costs, the lower labor intensity, and the possibility to use other fish species, the use of the Comet assay is preferred over the SCE assay. In this study, the Comet assay gave a similar result for the positive control EMS, and a same tendency as the SCE assay pointing at increased DNA damage upon exposure of the fish to River Rhine water. However, the increase in the Comet assay data obtained for gill cells of fish exposed to River Rhine water was not statistically significantly increased, whereas the SCE scores were statistically significantly higher than those in controls. This suggests the Comet assay to be less sensitive than the SCE test. This may be due to the nature of the chemicals present and the fact that the two biomarkers may not be detecting the same class of pollutants. Increasing the number of fish may prove to solve this issue, although it is noted that for the Comet assay, the number of fish used was according to the recommendation described by Hartmann et al. [2003]. Given all this, it is concluded that the Comet assay is a useful addition but does not provide a substitute for the SCE endpoint in these in vivo genotoxicity studies. Future investigations and studies with other pollution types may be required to ascertain that also in these cases, test results between the Comet assay and the SCE assay are comparable.
It is concluded that prolonging the exposure time to River Rhine water from 11 to 42 days does not result in a significant increase in SCEs and DNA damage (Comet assay) in gill cells of the Eastern mudminnow and with an exposure time to River Rhine water of 42 days does result in a significant increase in SCEs. Although the SCE frequencies in the 11 and 42-day exposure groups are the same, a slight but not significant decrease in DNA damage is observed from 11 to 42 days using the Comet assay. Evaluation of chemical results showed no significant change in the overall water quality between the 42-day exposure group and the 11-day exposure group (Table II). It is concluded that only minor chemical variations occurred during the exposure period. Therefore, no marked changes in overall water quality will have influenced the results of the genotoxicity tests. So far, the compounds causing these effects are still unknown. Further studies are needed to investigate the presence of genotoxic micropollutants in surface water and in surface water derived drinking water to conclude whether or not extra purifications steps are required. It is also recommended to perform further studies to investigate the mechanisms of DNA damage depending on the exposure period.
Acknowledgements
The authors gratefully acknowledge the Dutch Forest Service, especially Mr. P. Zegers, and Mr. C. Luijten of the National Park “De Groote Peel” (Ospel, The Netherlands), for providing the Eastern mudminnows. We thank Dr. P.G. Stoks (RIWA) for valuable remarks on an earlier version of this work.