Acidobacteria

Svetlana N Dedysh

Svetlana N Dedysh

Winogradsky Institute of Microbiology, Research Center of Biotechnology RAS, Moscow, Russia

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Jaap S Sinninghe Damsté

Jaap S Sinninghe Damsté

NIOZ Royal Netherlands Institute for Sea Research, Utrecht University, AB Den Burg, The Netherlands

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First published: 22 January 2018
Citations: 46

Abstract

Acidobacteria are one of the globally distributed and highly diverse phyla of the domain Bacteria . These microorganisms inhabit a wide variety of terrestrial and aquatic habitats and are particularly abundant in acidic soils, peatlands and mineral iron-rich environments. Owing to the difficulties in cultivating Acidobacteria , the taxonomically described diversity within this phylum remains limited. All characterised representatives are Gram-negative, nonspore-forming bacteria that display a variety of cell morphologies. Most characterised acidobacteria are chemoheterotrophs, although photoheterotrophic members have also been described. Cells of these bacteria contain a number of characteristic lipids, which may be responsible for their environmental adaptations. Genomes of acidobacteria are up to 10 Mbp in size and encode a wide repertoire of carbohydrate-active enzymes involved in breakdown, utilisation and biosynthesis of diverse carbohydrates. Their functional role in the environment includes the decomposition of various biopolymers and participation in the global cycling of carbon, iron and hydrogen.

Key Concepts

  • Acidobacteria are one of the major bacterial groups in soils and peatlands.
  • Not all members of Acidobacteria are acidophiles; some subgroups within this phylum display preferences for neutral or slightly alkaline environments.
  • Representatives of this phylum can be cultured using modified techniques.
  • Mesophilic acidobacteria possess large genomes, which encode a wide repertoire of carbohydrate-active enzymes.
  • Acidobacteria utilise a broad range of complex carbon substrates and have the potential to participate in the cycling of plant-, fungal- and insect-derived organic matter.
  • Owing to their slow growth rates, acidobacteria become particularly important in the econiches where fast-acting degraders are absent or numerically insignificant.
  • Some ecologically important groups of acidobacteria are characterised by the presence of a quite unique membrane-spanning lipid, iso -diabolic acid, which is composed of two condensed iso- C 15 fatty acids.
  • In some acidobacteria, ether membrane lipids occur and they are suspected producers of the omnipresent bacterial tetraether lipids.

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