Volume 87, Issue 10 pp. 883-900
Article
Free Access

Detection and Occurrence of Indicator Organisms and Pathogens

Farag A. Samhan

Farag A. Samhan

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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Maggie R. Kronlein

Maggie R. Kronlein

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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Umama Fakher

Umama Fakher

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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Cathrine Kronlein

Cathrine Kronlein

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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Robert D. Stedtfeld

Robert D. Stedtfeld

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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Syed A. Hashsham

Syed A. Hashsham

Department of Water Pollution Control, National Research Centre, 33 El Bohouth, P.O. 12622, Ad-Doqi, Giza, Egypt

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First published: 01 October 2015
Citations: 4

Abstract

This review summarizes the literature pertaining to the occurrence and detection of indicator organisms and pathogens published during 2014. It is organized into the following sections: i) detection and quantification of fecal indicators and waterborne pathogens, ii) microbial source tracking (MST) using genotypic and phenotypic methods, iii) antibiotic resistant bacteria (ARB), iv) live vs. dead cell differentiation methods, and v) next generation sequencing (NGS).

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