Volume 2021, Issue 1 5531136
Research Article
Open Access

Study on the Antianxiety Mechanism of Suanzaoren Decoction Based on Network Pharmacology and Molecular Docking

Xiaocong Xu

Xiaocong Xu

Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310015, China zcmu.edu.cn

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Bingbing Gao

Bingbing Gao

The Second Affiliated Hospital of Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310015, China z2hospital.com

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Xiongying Li

Corresponding Author

Xiongying Li

Jiangxi College of Traditional Chinese Medicine, Fuzhou, Jiangxi 344000, China

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Shanshan Lei

Corresponding Author

Shanshan Lei

Department of Medicine, Zhejiang Academy of Traditional Chinese Medicine, Hangzhou, Zhejiang 310015, China zcmu.edu.cn

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First published: 31 July 2021
Citations: 1
Academic Editor: Caio P. Fernandes

Abstract

Objective. Suanzaoren Decoction (SZRT) is a classic decoction to calm the nerves in traditional Chinese medicine (TCM). It has been extensively treated as an antianxiety drug in modern times, but the material basis and pharmacological mechanisms are still unclear. To explore the material basis and corresponding potential targets, as well as to elucidate the mechanism of SZRT, network pharmacology and molecular docking methods were utilized. Methods. The main chemical compounds and potential targets of SZRT were collected from the pharmacological database analysis platform (TCMSP). Anxiety targets were obtained from the GeneCards database. Then, a target compound network was established using overlapping genes and the corresponding potential compounds. Protein interaction analysis, GO enrichment, and KEGG pathway enrichment were performed using the STRING database, DAVID database, and KOBAS database. Finally, molecular docking was conducted between MAOB and its corresponding active compound in SZRT to further verify the results. Results. A total of 137 active components in SZRT were screened from the TCMSP database, and 210 corresponding targets were predicted. A total of 5434 anxiety-related targets were obtained from the disease target database, and finally 22 potential targets of SZRT on antianxiety were obtained. The constructed C-T network showed that the average degree of active components was 5.4, and four of them interacted with six or more targets. PPI analysis shows that key genes such as MAOA, MAOB, IL1B, TNF, NR3CI, and HTR3A were identified as potential therapeutic targets. A pathway analysis showed that SZRT may participate in neurotransmitter regulation and immunoregulation in a synergistic way to treat anxiety. The binding energy between the active compounds and MAOB was low, indicating good binding. The results of molecular docking showed that all the 10 active ingredients were able to successfully dock with MAOB, and the binding energy of coumaroyltyramine with MAOB was the lowest, that is, −9.6 kcal/mol, and the binding method was hydrogen bonding. Conclusions. SZRT produces antianxiety effects mainly by affecting the neurotransmitter release, transmission, and immunoregulation. This study provides a new approach to elucidating the molecular mechanism and material basis of SZRT in the treatment of anxiety, and it will also benefit the application of TCM in modern medicine.

1. Introduction

Anxiety disorder is the most common type of mental illness. It is manifested by persistent anxiety, tension, panic, and other anxieties, accompanied by autonomic disorders, muscle tension, and kinesthesia. Most of the symptoms start early in children, adolescents, and adults. Unlike normal or stress-induced transient anxiety, it is continuous and impairs daily functions. Women’s anxiety is twice as much as men. Anxiety disorder mainly includes generalized anxiety disorder (GAD) and panic disorder (PD). GAD, also known as “chronic anxiety,” is characterized by excessive anxiety, which is generalized and persistent, often exhibiting somatic symptoms, including headache and gastrointestinal symptoms [1]. PD, also known as “acute anxiety,” is a type of acute recurrent episodes of severe anxiety (panic) characterized by sudden high levels of fear (often reaching a peak within a few minutes [2]) which may be accompanied by palpitations and difficulty in breathing, profuse sweating, dizziness, general numbness, and other physical symptoms.

The pathogenesis of anxiety disorders is complex, and it has not been elucidated yet. The molecular mechanism is related to neurotransmitters and their receptors, hypothalamus-pituitary-adrenal axis, hypothalamus-pituitary-adrenal axis, opioid nervous system, hormone levels, oxidation, etc. Many drugs are available to treat anxiety, including adrenergic receptor blockers (e.g., propranolol), tricyclic antidepressants (TCA and imipramine), monoamine oxidase inhibitors (MAOIs such as phenylethyl trap), and benzodiazepines (e.g., DZP), selective 5-HT reuptake inhibitors (e.g., fluoxetine), selective 5-HT receptor ligand inhibitors (e.g., buspirone), and HT1A receptor partial agonists. However, these drugs have side effects partly, such as anticholinergic cardiovascular, autonomic dysfunction, or drug dependence [3].

Traditional Chinese medicine (TCM) has been used in China for thousands of years and exhibits good therapeutic effects, few side effects, and multiple pathway regulation for the prevention and treatment of anxiety. Suanzaoren Decoction (SZRT) first recorded in “Shennong Bencao Jing” consists of five herbs with different percentages in weight: Ziziphi Spinosae Semen (SZR, 33.33%), Glycyrrhizae Radix et Rhizoma (GC, 13.33%), Anemarrhenae Rhizoma (ZM, 13.33%), Poria (FL, 26.67%), and Chuanxiong Rhizoma (CX, 13.33%). It has exhibited excellent effect on antianxiety or anti-insomnia in clinical practice in China for hundreds of years. Modern clinical studies showed that SZRT could improve GAD [4] and anxiety insomnia [5]; pharmacological studies also validated that SZRT can effectively improve anxiety disorder in a high plus maze experiment of rats and clinically alleviate anxiety symptoms [6]. The alcohol extracts of Ziziphi Spinosae Semen [7] and Anemarrhenae Rhizoma [8] had an antianxiety-like behavior in mice. Although the therapeutic effect of SZRT is attractive, the molecular mechanism of action has not been well understood. Although some traditional approaches including chemical analyses [7] and bioactivity tests have been performed to study SZRT, its pharmacological mechanism and material basis have not been fully elucidated.

Here, based on the system’s pharmacology framework [9], it was used to evaluated the molecular pathogenesis of anxiety and elucidate the action mechanism of clinically effective formula SZRT. First, the active ingredients of SZRT were screened via OB (oral bioavailability) and DL (drug-likeness) evaluation. Then, the active ingredients were utilized as baits to predict the potential targets, and the compound-target interactions at the pharmacological level were determined. Subsequently, the targets were used as baits to determine the corresponding pathways from the KEGG database [10]. A target-pathway (T-P) network was constructed for network analysis. The results will be helpful for understanding of anxiety pathogenesis, but also clarified the molecular mechanism of SZRT, promoting the development of TCM in the treatment of anxiety. An overview of the experimental procedures for SZRT is shown in Figure 1.

Details are in the caption following the image
An overview of the experimental procedures for SZRT.

2. Methods

2.1. Screening of Active Ingredients

The TCM System Pharmacology Database (TCMSP, http://lsp.nwu.edu.cn/tcmsp.php) [11] is generally used as a platform for systems pharmacology and a compound ingredient database. In this study, the TCMSP database was used to search the ingredients of SZRT. Ziziphi Spinosae Semen (Suan Zao Ren, SZR), Glycyrrhizae Radix et Rhizoma (Gan Cao, GC), Anemarrhenae Rhizoma (Zhi Mu, ZM), Poria (Fu Lin, FL), and Chuanxiong Rhizoma (Chuan Xiong, CX) were entered into the retrieval field, and the ingredients of each herb and ADME characteristics were obtained. Among the ADME characteristics, the threshold values of OB were set as ≥30%, and DL was set as ≥0.18. Finally, the matched ingredients were treated as the candidate active ingredients.

2.2. Collection of Anxiety-Related Targets and Construction of Active Ingredients-Target Network

The candidate ingredients of five herbs (including SZR, GC, ZM, FL, and CX) of SZRT were put into the TCMSP database, and the candidate protein targets were acquired. Then, we collected and arranged these targets using Excel and finally received the candidate protein targets corresponding to SZRT. Then, the UniProt Knowledgebase (http://www.uniprot.org/) was used to convert the screened-out protein names to gene names. In the end, the dataset of SZRT active compounds and related target genes were obtained.

Additionally, GeneCards (https://www.genecards.org/) was used to collect anxiety-related target genes, and the term anxiety was searched as the keyword. Then, the dataset of SZRT compounds and related target genes and genes related to anxiety were integrated, and the overlapping genes were determined as the SZRT’s active compounds’ target genes on antianxiety. Cytoscape 3.2.1 software was used to establish the active compounds-anxiety target genes network (C-T network).

2.3. PPI and Hub Gene Analysis

Import the screened-out target genes into the STRING database (https://string-db.org/) for analyzing the protein interaction and establishing the PPI network diagram. The PPI data were imported into Cytoscape 3.2.1 software for visual analysis, and cytoHubba plug-in was used to find the hub gene mapping from SZRT to the onset of anxiety.

2.4. GO Enrichment Analysis

The intersection targets of SZRT and anxiety were imported into the DAVID (https://david.ncifcrf.gov/) database for GO function enrichment analysis. GO function annotations mainly include biological process (BP), cell component (CC), and molecular function (MF). Enriched GO terms were defined as significant with P < 0.05, and the top 10 enriched functions were analyzed and drawn using GraphPad Prism 8.0 software.

2.5. Establishment of T-P Network

The DAVID (https://david.ncifcrf.gov/) database was used to transform the target genes’ ID; then, the KOBAS database (http://kobas.cbi.pku.edu.cn/) was utilized for KEGG pathway enrichment analysis. Cytoscape software 3.2.1 was used to establish a visualized network of T-P network. In the networks, each target or pathway was expressed by one node, and each interaction was represented by an edge.

2.6. Autodocking of Active Compounds of SZRT with Target Protein

AutoDock 4.2.6 was used (http://autodock.Scripps.Edu/news/autodock4-2.6) as a molecular docking software for flexible docking. Analysis of KEGG pathways showed that MAOB is a vital protein target. The structure of MAOB was obtained from the PDB database (http://www.rcsb.org/pdb/home/home.do); the protein code was PDB 2V60. Using PyMOL 2.7 software, the primary ligand conformation of the target protein was extracted and saved as a PDB format file. Then, AutoDock tools (ADT) was used to remove the water molecules. Hydrogenation and charge treatment of MAOB were conducted and saved as a PDBQT format file. The ligands of Mol2 format file were processed by ADT and saved as a PDBQT format. Then, the docking results of compounds and proteins were analyzed using AutoDock and visualized using PyMOL 2.7.

3. Results

3.1. Active Compounds of SZRT

From the TCMSP database, a total of 617 related compounds in the SZRT were found: 33 ingredients (5.3%) in Suan Zao Ren (Ziziphi Spinosae Semen, SZR), 280 ingredients (45.4%) in Gan Cao (Glycyrrhizae Radix et Rhizoma, GC), 81 ingredients (13.1%) in Zhi Mu (Anemarrhenae Rhizoma, ZM), 34 ingredients (5.5%) in Fu Lin (Poria, FL), and 189 ingredients (30.6%) in Chuan Xiong (Chuanxiong Rhizoma, CX). To screen out the active ingredients, the ADME properties (OB ≥ 30%, DL ≥ 0.18) were used to evaluate these ingredients. As a result, 137 active compounds were obtained. Then, the herb-active compounds were constructed as shown in Table 1.

Table 1. The main active material parameters of SZRT.
Herb Molecule name OB (%) DL Structure
GC DFV 32.76 0.18 image
GC Glycyrrhiza flavonol A 41.28 0.6 image
GC Pinocembrin 64.72 0.18 image
GC 1-Methoxyphaseollidin 69.98 0.64 image
GC Glypallichalcone 61.6 0.19 image
GC Licopyranocoumarin 80.36 0.65 image
GC Licochalcone B 76.76 0.19 image
GC Glycyrol 90.78 0.67 image
GC Icos-5-enoic acid 30.7 0.2 image
GC 18α-Hydroxyglycyrrhetic acid 41.16 0.71 image
GC Gadelaidic acid 30.7 0.2 image
GC Shinpterocarpin 80.3 0.73 image
GC Formononetin 69.67 0.21 image
GC Liquiritin 65.69 0.74 image
GC Naringenin 59.29 0.21 image
GC, CX Sitosterol 36.91 0.75 image
GC HMO 38.37 0.21 image
GC Gancaonin H 50.1 0.78 image
GC Vestitol 74.66 0.21 image
GC Glycyroside 37.25 0.79 image
GC Calycosin 47.75 0.24 image1
GC Isoglycyrol 44.7 0.84 image1
GC Licorice glycoside E 32.89 0.27 image2
GC Xambioona 54.85 0.87 image3
GC Quercetin 46.43 0.28 image4
GC Kanzonol F 32.47 0.89 image5
GC Jaranol 50.83 0.29 image6
GC (-)-Medicocarpin 40.99 0.95 image7
GC Licochalcone a 40.79 0.29 image8
GC Euchrenone 30.29 0.57 image
GC Odoratin 49.95 0.3 image
ZM Marmesin 50.28 0.18 image
GC Isorhamnetin 49.6 0.31 image
ZM Coumaroyltyramine 112.9 0.2 image
GC Glabranin 52.9 0.31 image
ZM, GC Kaempferol 41.88 0.24 image
GC Licochalcone G 49.25 0.32 image
ZM Anhydroicaritin 45.41 0.44 image
GC Quercetin der. 46.45 0.33 image
ZM Asperglaucide 58.02 0.52 image
GC Inflacoumarin A 39.71 0.33 image
ZM Chrysanthemaxanthin 38.72 0.58 image
GC Medicarpin 49.22 0.34 image
ZM Icariin I 41.58 0.61 image
GC Glepidotin B 64.46 0.34 image4
ZM Hippeastrine 51.65 0.62 image
GC Glepidotin A 44.72 0.35 image
ZM Stigmasterol 43.83 0.76 image
GC Glyzaglabrin 61.07 0.35 image
ZM Anemarsaponin F_qt 60.06 0.79 image
GC Licocoumarone 33.21 0.36 image
ZM Diosgenin 80.88 0.81 image
GC Lupiwighteone 51.64 0.37 image
ZM Mangiferolic acid 36.16 0.84 image
GC Eurycarpin A 43.28 0.37 image
ZM Anemarsaponin E_qt 30.67 0.86 image
GC Dehydroglyasperins C 53.82 0.37 image
ZM Timosaponin B III_qt 35.26 0.87 image
GC Gancaonin G 60.44 0.39 image
ZM Anemarsaponin C_qt 35.5 0.87 image
GC Glyasperin C 45.56 0.4 image
FL ergosta-7, 22E-dien-3beta-ol 43.51 0.72 image
GC Gancaonin A 51.08 0.4 image
FL Poricoic acid B 30.52 0.75 image
GC Glyasperins M 72.67 0.59 image
FL Poricoic acid C 38.15 0.75 image
GC Sigmoidin-B 34.88 0.41 image
FL Hederagenin 36.91 0.75 image
GC Isotrifoliol 31.94 0.42 image
FL Poricoicacid A 30.61 0.76 image
GC Licoisoflavone 41.61 0.42 image
FL Cerevisterol 37.96 0.77 image
GC Isolicoflavonol 45.17 0.42 image
FL Trametenolic acid 38.71 0.8 image
GC Glyasperin B 65.22 0.44 image
FL 7, 9(11)-Dehydropachymic acid 35.11 0.81 image
GC Glabrene 46.27 0.44 image
FL Ergosterol peroxide 40.36 0.81 image
GC Phaseolinisoflavan 32.01 0.45 image
FL Pachymic acid 33.63 0.81 image
GC Gancaonin B 48.79 0.45 image
FL Dehydroeburicoic acid 44.17 0.83 image
GC Licoricone 63.58 0.47 image
CX Mandenol 42 0.19 image
GC Glycyrin 52.61 0.47 image
CX Senkyunone 47.66 0.24 image
GC Glabridin 53.25 0.47 image
CX Perlolyrine 65.95 0.27 image
GC Licoagroisoflavone 57.28 0.49 image
CX Myricanone 40.6 0.51 image
GC Glabrone 52.51 0.5 image
CX FA 68.96 0.71 image
GC Kanzonols W 50.48 0.52 image
CX Wallichilide 42.31 0.71 image
GC Inermine 75.18 0.54 image
SZR (S)-Coclaurine 42.35 0.24 image
GC Glyasperin F 75.84 0.54 image
SZR Zizyphusine 41.53 0.55 image
GC Licoisoflavanone 52.47 0.54 image
SZR Jujuboside A_qt 34.96 0.62 image
GC Semilicoisoflavone B 48.78 0.55 image
SZR Daucosterol 36.91 0.75 image
GC Licoisoflavone B 38.93 0.55 image
SZR Phytosterol 36.91 0.75 image
GC 3′-Methoxyglabridin 46.16 0.57 image
SZR Swertisin 31.83 0.75 image
GC Licoagrocarpin 58.81 0.58 image
SZR Ceanothic acid 33.41 0.77 image
GC Phaseol 78.77 0.58 image
SZR Sanjoinenine 67.28 0.79 image
GC 3,22-Dihydroxy-11-oxo-delta (12)-oleanene-27-alpha-methoxycarbonyl-29-oic acid 34.32 0.55 image
SZR, GC Mairin 55.38 0.78 image
GC 1,3-Dihydroxy-8,9-Dimethoxy-6-Benzofurano[3,2-c]chromenone 62.9 0.53 image
GC 3-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-8-(3-methylbut-2-enyl) chromone 66.37 0.41 image
GC 8-Prenylated eriodictyol 53.79 0.4 image
GC 5,7-Dihydroxy-3-(4-Methoxyphenyl)-8-(3-methylbut-2-enyl) chromone 30.49 0.41 image
GC (2R)-7-Hydroxy-2-(4-hydroxyphenyl) chroman-4-one 71.12 0.18 image
GC 2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-6-(3-methylbut-2-enyl) chromone 44.15 0.41 image
GC (2S)-6-(2,4-Dihydroxyphenyl)-2-(2-hydroxypropan-2-yl)-4-methoxy-2,3-dihydrofuro[3,2-g]chromen-7-one 60.25 0.63 image
GC 3-(2,4-Dihydroxyphenyl)-8-(1,1-dimethylprop-2-enyl)-7-hydroxy-5-methoxy-coumarin 59.62 0.43 image
GC 7,2′,4′-Trihydroxy-5-methoxy-3-arylcoumarin 83.71 0.27 image
GC 1,3-Dihydroxy-9-methoxy-6-benzofurano[3,2-c]chromenone 48.14 0.43 image
GC (E)-3-[3,4-Dihydroxy-5-(3-methylbut-2-enyl) phenyl]-1-(2,4-dihydroxyphenyl) prop-2-en-1-one 46.27 0.31 image
GC 8-(6-Hydroxy-2-benzofuranyl)-2,2-dimethyl-5-chromenol 58.44 0.38 image
GC (2S)-2-[4-Hydroxy-3-(3-methylbut-2-enyl) phenyl]-8,8-dimethyl-2,3-dihydropyrano[2,3-f]chromen-4-one 31.79 0.72 image
ZM (Z)-3-(4-Hydroxy-3-methoxy-phenyl)-N-[2-(4-hydroxyphenyl) ethyl]acrylamide 118.35 0.26 image
FL (2R)-2-[(3S,5R,10S,13R,14R,16R,17R)-3,16-Dihydroxy-4,4,10,13,14-pentamethyl-2,3,5,6,12,15,16,17-octahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-isopropyl-hex-5-enoic acid 31.07 0.82 image
FL (2R)-2-[(3S,5R,10S,13R,14R,16R,17R)-3,16-Dihydroxy-4,4,10,13,14-pentamethyl-2,3,5,6,12,15,16,17-octahydro-1H-cyclopenta[a]phenanthren-17-yl]-6-methylhept-5-enoic acid 30.93 0.81 image
GC 7-Methoxy-2-methyl isoflavone 42.56 0.2 image
FL 3β-Hydroxy-24-methylene-8-lanostene-21-oic acid 38.7 0.81 image
GC (2S)-7-Hydroxy-2-(4-hydroxyphenyl)-8-(3-methylbut-2-enyl) chroman-4-one 36.57 0.32 image
GC 2-[(3R)-8,8-Dimethyl-3,4-dihydro-2H-pyrano[6,5-f]chromen-3-yl]-5-methoxyphenol 36.21 0.52 image
GC (E)-1-(2,4-Dihydroxyphenyl)-3-(2,2-dimethylchromen-6-yl) prop-2-en-1-one 39.62 0.35 image
GC 3′-Hydroxy-4′-O-Methylglabridin 43.71 0.57 image
GC 6-Prenylated eriodictyol 39.22 0.41 image
GC 7-Acetoxy-2-methylisoflavone 38.92 0.26 image
FL (2R)-2-[(5R,10S,13R,14R,16R,17R)-16-Hydroxy-3-keto-4,4,10,13,14-pentamethyl-1,2,5,6,12,15,16,17-octahydrocyclopenta[a]phenanthren-17-yl]-5-isopropyl-hex-5-enoic acid 38.26 0.82 image

For 137 ingredients, many of them were validated to display vital biological activities including immunoregulatory activities, neurotransmitter regulation, and endocrine regulation. For instance, swertisin with good pharmacokinetic profiles was obtained from SZR, with multifarious pharmacological properties including neurotransmitter regulation activity and adenosine A1 receptor (ADORA1) antagonistic property [12]. Kaempferol markedly protected against CPF-induced neuronal damage, increased the AChE activity, and induced a better performance in the behavioral tests [13]. These results indicate that the active compounds may show synergetic pharmacological effects on anxiety. Besides, mairin is a common potential active ingredient of SZR and GC; sitosterol is a common potential active ingredient of GC and CX; and kaempferol is a common potential active ingredient of ZM and GC. These candidate compounds could be the key elements for curing anxiety.

3.2. Compound-Targets (C-T) Network Analysis

The compounds which had no targets based on the TCMSP database or did not have the corresponding gene name in the UniProt database were deleted; finally, 205 target genes corresponding to 112 compounds were obtained. The pathogenesis of anxiety is very complex. A total of 5434 anxiety-related genes were found in the GeneCards database, and 336 anxiety-related targets with a relevance score of ≥10 and P < 0.05 were obtained. To determine which of the 205 target genes are related to anxiety, the target genes were further mapped to 336 anxiety-related targets, and finally 22 overlapping target genes were screened out. A visual graph of the C-T network was established based on the potential ingredients and targets shown in Figure 2. The C-T network had a total of 79 nodes (22 targets and 57 active components), forming 119 relationships. The C-T network analysis shows that the average degree of per target to compound is 5.4, elucidating the multiple target properties of SZRT.

Details are in the caption following the image
C-T network. A compound node and a protein node are linked if the protein is targeted by the corresponding compound. Node size is proportional to its degree. The green cycles indicates active compounds and red were targets.

The C-T network analysis showed that four active ingredients could interact with six or more targets, including quercetin, kaempferol, stigmasterol, and 7-methoxy-2-methyl isoflavone. Moreover, seven targets could interact with more than four active ingredients, including acetylcholinesterase (ACHE), beta-2 adrenergic receptor (ADRB2), gamma-aminobutyric acid receptor subunit alpha-1 (GABRA1), amine oxidase (flavin-containing) B (MAOB), glucocorticoid receptor (NR3C1), sodium-dependent dopamine transporter (SLC6A3), and superoxide dismutase [Cu-Zn] (SOD1), indicating the antianxiety effect of SZRT with multiple pathways and multiple targets. The results are shown in Table 2.

Table 2. The related pathway of the antianxiety effect of SZRT.
Term ID P value Input gene name
Cytokine-cytokine receptor interaction hsa04060 5.86E − 07 CCL2|CXCL8|IL1B|TNF|IL10
IL-17 signaling pathway hsa04657 2.47E − 07 CCL2|CXCL8|IL1B|TNF
NOD-like receptor signaling pathway hsa04621 3.06E − 06 CCL2|CXCL8|IL1B|TNF
NF-kappa B signaling pathway hsa04064 2.60E − 05 CXCL8|IL1B|TNF
Toll-like receptor signaling pathway hsa04620 2.92E − 05 CXCL8|IL1B|TNF
C-type lectin receptor signaling pathway hsa04625 2.92E − 05 IL10|IL1B|TNF
MAPK signaling pathway hsa04010 0.0006 IL1B|TNF|TP53
Neuroactive ligand-receptor interaction hsa04080 1.15E − 06 ADRB2|GABRA2|GABRA1|NR3C1|DRD1
Amphetamine addiction hsa05031 7.41E − 08 SLC6A3|MAOB|MAOA|DRD1
Dopaminergic synapse hsa04728 9.32E − 07 SLC6A3|MAOB|MAOA|DRD1
Serotonergic synapse hsa04726 3.91E − 05 MAOB|MAOA|HTR3A
Morphine addiction hsa05032 1.98E − 05 GABRA2|GABRA1|DRD1
Phenylalanine metabolism hsa00360 5.09E − 05 MAOB|MAOA
Tryptophan metabolism hsa00380 2.13E − 06 MAOB|CYP1A2|MAOA
Morphine addiction hsa05032 0.0001 GABRA2|GABRA1|DRD1
Cocaine addiction hsa05030 2.12E − 08 SLC6A3|MAOB|MAOA|DRD1

3.3. PPI and Hub Gene Analysis

The data obtained from the STRING database were loaded to Cytoscape software, and 22 target genes were found to form a total of 84 protein interaction relationships as shown in Figure 3. The combined score of 20 of the protein interaction relationships was ≥0.9, which was regarded as a high degree of confidence. The protein interaction network was then imported into Cytoscape software 3.2.1 and analyzed using cytoHubba plug-in; the top 10 key genes were obtained according to the degree. Among these hub target genes, CRP, TP53, IL1B, TNF, and CCL2 are inflammatory factors. 5-HT is a vital neurotransmitter in the control of anxiety. HTR3A is a 5-HT receptor; MAOA resolves 5-HT. These indicate that SZRT antianxiety might regulate inflammatory factors and neurotransmitters.

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The PPI network for 22 targets.

3.4. GO Enrichment Analysis

A GO enrichment analysis was performed on the 22 potential targets obtained, sorting the BP terms, cellular component (CC), and MF terms in the ascending order of logP value. The top 10 are shown in Figure 4. As shown in Figure 4, the BPs were mainly involved in inflammatory response, immune response, redox process, and signal transduction. The CCs were mainly involved in the integral components of membrane, plasma membrane, extracellular space, extracellular region, integral component of plasma membrane, synapse, neuronal cell body, cell junction, cell surface, and membrane raft. The MFs were mainly involved in oxidoreductase activity, extracellular ligand-gated ion channel activity, cytokine activity, enzyme binding, dopamine:sodium symporter activity, caffeine oxidase activity, GABA-gated chloride ion channel activity, and primary amine oxidase activity. All these results indicate that SZRT could be used for the treatment of antianxiety by multiple pathways and exhibits a synergistic effect by interactive effect.

Details are in the caption following the image
Gene Ontology (GO) analysis. (a) BF. (b) CC. (c) MF.
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Gene Ontology (GO) analysis. (a) BF. (b) CC. (c) MF.
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Gene Ontology (GO) analysis. (a) BF. (b) CC. (c) MF.

3.5. KEGG Pathway Enrichment Analysis and T-P Network Analysis

As two of the 22 target genes did not map into the pathways in the KOBAS database, 20 targets were mapped to 149 pathways. The T-P network including 169 nodes and 303 edges is shown in Figure 5. In the T-P network, the average degree per target gene was 15.1. We also found that 16 targets could be mapped into multiple pathways (n ≥ 5), which might be the vital factors for anxiety. Additionally, 39 pathways were also interceded by a variety of targets (n ≥ 3), indicating that cross-talk between multiple pathways and targets might be the highlight of pathogenesis of anxiety.

Details are in the caption following the image
The targets-pathway network of SZRT for treating anxiety. The red diamond nodes represent genes and the yellow ones are pathways.

To further find the key pathways, the top 40 pathways were analyzed; 16 pathways were related to anxiety as shown in Table 2. NF-kappa B signaling pathway, cytokine-cytokine receptor interaction, IL-17 signaling pathway, toll-like receptor signaling pathway, TNF signaling pathway, NOD-like receptor signaling pathway, and C-type lectin receptor signaling pathway belong to immunoregulation. Dopaminergic synapse, serotonergic synapse, tryptophan metabolism, amphetamine addiction, phenylalanine metabolism, and neuroactive ligand-receptor interaction belong to multi-neurotransmitter regulation.

3.6. Docking Results of Active Compounds of SZRT and MAOB

AutoDock and PyMOL 2.7 software were used to dock 10 active ingredients such as quercetin, stigmasterol, coumaroyltyramine, glypallichalcone, and HMO with the key target MAOB. The docking results are shown in Table 3. The results show that 10 active ingredients could be docked with MAOB: coumaroyltyramine had the lowest binding energy with MAOB, −9.6 kcal/mol. Coumaroyltyramine formed hydrogen bonds with the amino acid residues LEU-164 and PHE-168 in MAOB (shown in Figure 6). HMO formed hydrogen bonds with the amino acid residues TYR-435 and TYR-326 in MAOB (shown in Figure 7). In addition, the binding energies of quercetin, isorhamnetin, and glypallichalcone to MAOB were also relatively low.

Table 3. Predicted binding energies for active components of SZRT docked with MAOB.
Targets (V) Active compounds Binding energy (kcal/mol)
260 Quercetin −8.6
260 Isorhamnetin −8.8
260 Stigmasterol −3.3
260 coumaroyltyramine −9.6
260 (S)-Coclaurine −7.5
260 DFV −8.7
260 Pinocembrin −6.3
260 7-Methoxy-2-methyl isoflavone −7.6
260 Glypallichalcone −8.6
260 HMO −8.7
Details are in the caption following the image
The molecular docking result of coumaroyltyramine with MAOB.
Details are in the caption following the image
The molecular docking result of HMO with MAOB.

4. Discussion

In this study, network pharmacology and molecular docking were used to analyze the antianxiety mechanism of SZRT. The C-T network contains 79 nodes, 22 targets, and 57 active ingredients, forming 119 relationships. The C-T network analysis shows that the average degree of each target compound is 5.4, indicating the multitarget characteristics of SZRT. Quercetin exhibited the highest degree of interactions with multiple protein targets. Previous studies showed that quercetin can mitigate anxiety behavior in elevated plus maze and Morris water maze tests [14] and adriamycin-induced anxiety-like rat [15] by the normalization of HPA axis function [16] and regulate the GABAergic nervous system [17]. Glabridin is one of the main flavonoid compounds obtained from Glycyrrhiza glabra and exhibits antianxiety biological activity and acts as a potential GABAA receptor [18]. We speculate that the effect of SZRT on antianxiety might be regulated by the nervous system. Many potential targets are also linked with multiple compounds of different herbs, which might exhibit synergistic effects or additive effects of SZRT in the treatment of anxiety. NR3C1 is targeted by four active compounds (Anemarsaponin F_qt, Anemarsaponin C_qt, Timosaponin B III_qt, and wallichilide), which might provide additive effects to endocrine regulation.

Furthermore, the 22 predicted targets were analyzed. It was found that CCL2, CRP, CXCL8, IL10, IL1B, TNF, and TP53 were related to immunoregulation. DRD1, SLC6A3, MAOA, MAOB, HTR3A, ADRB2, and SLC6A2 belong to monoamine neurotransmitters and their receptors, and GABRA1 and GABRA2 belong to amino acid neurotransmitter receptors, participating in neurotransmitter regulation. Besides, SOD1 and PON1 are important oxidoreductases. NR3C1 is a glucocorticoid receptor. These results indicate that the effect of SZRT in the treatment of anxiety is associated with regulating neurotransmitters, inflammatory reaction, endocrine, and antioxidation, exhibiting a comprehensive regulatory effect.

For further evaluation, 16 pathways were mainly enriched in the multi-neurotransmitter regulation module and inflammatory regulation module. The pathways of multi-neurotransmitters could be approximately divided into two classes: (1) related to the synthesis, secretion, and recycling of neurotransmitters including dopaminergic synapse, serotonergic synapse, tryptophan metabolism, amphetamine addiction, and phenylalanine metabolism pathways and (2) related to the sedative or hypnotic effects such as morphine, addiction, and cocaine addiction. The pathways of neurotransmitter regulation were enriched in the targets of MAOA, MAOB, SLC6A3, and DRD1.

Anxiety is characterized by the disorder of neural factors. Many neurotransmitter substances such as 5-HT and DA are directly related to the occurrence of anxiety. The dopaminergic synapse and serotonergic synapse pathways play an important role in the synthesis, secretion, and recycling of 5-HT, DA, MAOA, MAOB, and SLC6A3 in dopaminergic synapse and serotonergic synapse pathway regulated by stigmasterol from ZM. Owing to its MAO enzyme-inhibiting properties, quercetin might provide the anticatatonic effect of L-dopa plus carbidopa treatment [19].

Anxiety is not only closely related to the nervous system, but it is also associated with immune function. Although the causal relationship between anxiety and immune abnormalities is not clear, an abnormal immune status can trigger anxiety, and immune dysfunction does not exist in patients with anxiety. Cytokines are involved in the regulation of mood and behavior and play an important role in mental disorders such as anxiety; for example, IL-4 knockout mice exhibit anxiety-like behavior [20]. Studies have shown that IL-1, IL-2, and TNF-α could induce anxiety in animals [21]; TNF-α could reduce the function of prefrontal cortex-limbic system, eventually causing anxiety and depression symptoms [22]. Zhang [23] also found that CRP, IL-1α, IL-6, IL-12, INF-γ, and GM-CSF levels were higher in patients with GAD, and they were positively correlated with the severity of anxiety disorder. Therefore, it is speculated that an inflammatory response activation system might be involved in the regulation of anxiety.

In this study, CCL2, CXCL8, IL1B, TNF, and IL10 were found to have enriched cytokine-cytokine receptor interaction, IL-17 signaling pathway, NOD-like receptor signaling pathway, and NF-kappa B signaling. Previous studies have shown that some cytokines and chemokines such as IL1B can impact the activity of monoamine neurotransmitters and cause anxiety-like behavior [24]. SZRT showed lower serum TNF-α and IL-2 levels in EMP model rats [25]. These results indicate that the mechanism of SZRT anxiolytic efficacy might be related to immunoregulation.

The pathogenesis of anxiety is complex. More and more researches have been made on the relationship between oxidative stress and anxiety. The research of Hovatta showed that the antioxidation defense mechanism was closely related to anxiety [26]. Clinical research found that serum superoxide dismutase (SOD) in patients with GAD was positively correlated with total anxiety score; MDA was negatively related to it [27]. And improving of oxidative stress might be one of the antianxiety mechanisms [28, 29]. The same results were also shown in various anxiety model animals. The contents of catalase (CAT) and SOD in brain tissue and serum of anxiety animals were significantly reduced [30, 31]. Antioxidant therapy could alleviate the anxiety symptoms of model animals. Liquiritin, naringenin, diosgenin, and quercetin are potential active components in SZRT and mapped to anxiety-related targets of SOD1. Liquiritin, naringenin, and quercetin are flavonoid antioxidant and diosgenin isolated from ZM, which all have a remarkable antioxidant effect [3234] and enhanced SOD activity in many animal models. It had also been reported that quercetin and naringenin also alleviate anxiety-like behaviors and regulated oxidative signs [35, 36]. These indicated that the anxiolytic effects of SZRT may be related to antioxidant, and the ingredients of liquiritin, naringenin, diosgenin, and quercetin are the key antioxidants.

Further molecular docking analysis showed that the active ingredients predicted by the pharmacophore target can all bind to the related target protein, and coumaroyltyramine has a strong binding activity to monoamine oxidase MAOB. This study initially revealed the potential active ingredients of SZRT anxiolytic activity and its possible mechanism of action, providing a basis for further research on the material basis of SZRT anxiolytic efficacy and development of antianxiety components of TCM.

This study utilized network pharmacology and molecular docking methods based on the TCMSP database, GeneCards database, and KEGG database to study the potential material basis and antianxiety mechanism of SZRT. By analyzing the predicted targets and pathways, it was found that 57 potential active ingredients of SZRT correspond to 22 anxiety targets. These active ingredients and targets may help to further verify the antianxiety mechanism of SZRT. The C-T network and PPI network analyses showed that the core active ingredients of SZRT such as sitosterol, kaempferol, quercetin, and 7-methoxy-2-methyl isoflavone might act on targets such as MAOA, MAOB, IL1B, TNF, NR3CI, and HTR3A, affecting the neurotransmitter regulation and immunoregulation pathways to produce anxiolytic effects. In this study, network pharmacology and molecular docking methods were used to predict the anxiolytic effects of SZRT and provide a theoretical basis for its further development and application. However, the specific mechanism and material basis should be confirmed in vivo and in vitro.

Disclosure

Xiaocong Xu and Bingbing Gao are the co-first authors.

Conflicts of Interest

The authors declare that they have no conflicts of interest regarding the publication of this paper.

Authors’ Contributions

Shanshan Lei conceived and designed the experiments. Bingbing Gao, Xiaocong Xu, and Xiongying Li contributed significantly to analysis and manuscript preparation. Xiaocong Xu and Bingbing Gao contributed equally to this work.

Acknowledgments

This study was supported by the National Science Foundation of China (no. 81803760).

    Data Availability

    The data to support the findings of this study are available from the corresponding author upon request.

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