Early View
Original Article

Mycophenolate mofetil-induced colitis versus colonic graft-versus-host disease: a comparative histologic study with artificial intelligence model development

Rofyda Elhalaby

Rofyda Elhalaby

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Department of Pathology, Faculty of Medicine, Tanta University, Tanta, Egypt

Search for more papers by this author
Priyadharshini Sivasubramaniam

Priyadharshini Sivasubramaniam

Department of Pathology, Medical College of Wisconsin, Milwaukee, Wisconsin, USA

Search for more papers by this author
Benjamin J Van Treeck

Benjamin J Van Treeck

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Great Lakes Pathologists, Milwaukee, Wisconsin, USA

Search for more papers by this author
Lindsey Smith

Lindsey Smith

MySME, LLC, Birmingham, Alabama, USA

Search for more papers by this author
Nadarra Stokes

Nadarra Stokes

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Search for more papers by this author
Won-Tak Choi

Won-Tak Choi

Department of Pathology, University of California at San Francisco, San Francisco, California, USA

Search for more papers by this author
Huaibin Mabel Ko

Huaibin Mabel Ko

Department of Pathology and Cell Biology, Columbia University, New York, New York, USA

Search for more papers by this author
Roger K Moreira

Roger K Moreira

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Search for more papers by this author
Christopher P Hartley

Christopher P Hartley

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Search for more papers by this author
Catherine E Hagen

Corresponding Author

Catherine E Hagen

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA

Address for correspondence: Catherine E Hagen, MD, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA. e-mail: [email protected]

Search for more papers by this author
First published: 24 July 2025

Rofyda Elhalaby and Priyadharshini Sivasubramaniam contributed equally to this work.

Abstract

Aim

The aim of this study was to compare the histopathologic features of MMF-induced colitis and colonic GVHD and develop a digital tool using deep learning convolutional neural networks (CNNs) to semi-automate the quantification of eosinophils.

Methods

MMF and GVHD colitis cases were retrieved. A cohort of transplant patients who were at risk for developing GVHD and were on MMF at the time of biopsy was also identified. Cases were reviewed for histologic features and a deep learning CNN was trained to quantify lamina propria eosinophils. Clinical history was collected.

Results

Ninety-five patients were included in the study group: GVHD (n = 37), MMF (n = 25) and GVHD vs. MMF (n = 33). Within the GVHD vs. MMF group, one patient was thought to have definitive MMF colitis and one possible MMF colitis. The GVHD group had a significantly higher apoptotic count compared to the MMF group (median: 7 vs. 2, P = 0.03). Neuroendocrine aggregates were present in the GVHD (N = 12) and GVHD vs. MMF (N = 4) groups while absent in the MMF group. The MMF group had a higher semi-quantitative eosinophil score and a higher automated eosinophil count as detected by the deep learning CNN (median eos/HPF: MMF 19.2, GVHD vs. MMF 3.6, GVHD 3.4, P < 0.001).

Conclusions

Lower eosinophil counts, higher apoptotic counts and neuroendocrine cell aggregates favour the diagnosis of GVHD. AI models for eosinophil quantification may serve as an ancillary tool for assessing this differential diagnosis. Given the rarity of MMF-induced colitis in SCT patients, pathologists should have a high threshold for making this diagnosis in this population.

Graphical Abstract

Mycophenolate-induced colitis and graft-versus-host disease (GVHD) colitis have overlapping histology. Lower eosinophil counts, higher apoptotic counts and neuroendocrine cell aggregates are histological features that favour the diagnosis of GVHD. AI models for eosinophil quantification may serve as an ancillary tool for assessing this differential diagnosis.

Conflicts of interest

The authors have no relevant conflicts of interest to disclose.

Data availability statement

The data that support the findings of this study are available on request from the corresponding author. The data are not publicly available due to privacy or ethical restrictions.

The full text of this article hosted at iucr.org is unavailable due to technical difficulties.