Volume 33, Issue 10 pp. 1591-1603
Article
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Energetics of the disulfide bridge: An ab initio study

Weili Qian

Weili Qian

Biophysics Research Division and Department of Physics, University of Michigan, Ann Arbor, Michigan 48109

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Samuel Krimm

Samuel Krimm

Biophysics Research Division and Department of Physics, University of Michigan, Ann Arbor, Michigan 48109

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First published: October 1993
Citations: 9

Abstract

The energetics of the χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-1χ3χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-2 portion of the disulfide bridge have been obtained from an ab initio study of diethyl disulfide. Calculations at the 3-21G* level were done on relaxed structures at every ∼ 30° in χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-3 and χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-4, and the additional energies for small Δχ3 were obtained. Complete Eurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-5, χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-6) and χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-7urn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-8, χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-9) maps were computed from Fourier series expansions. These results have been used to calculate the energetics of 92 disulfide bridges in known protein structures, and to compare ab initio and molecular mechanics energies for some observed and predicted bridges. The differences found in relative energies and in χurn:x-wiley:00063525:media:BIP360331009:tex2gif-stack-10 values suggest that present energy functions give a limited description of the structural and energetic properties of the disulfide bridge. © 1993 John Wiley & Sons, Inc.

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