Volume 39, Issue 20 pp. 3649-3652
Communication

Dynamics of Hole Trapping by G, GG, and GGG in DNA

William B. Davis Dr.

William B. Davis Dr.

Institut für Physikalische und Theoretische Chemie Technische Universität München Lichtenbergstrasse 4, 85748 Garching (Germany) Fax: (+49) 89-289-13026

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Izabela Naydenova Dr.

Izabela Naydenova Dr.

Institut für Physikalische und Theoretische Chemie Technische Universität München Lichtenbergstrasse 4, 85748 Garching (Germany) Fax: (+49) 89-289-13026

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Reinhard Haselsberger Dipl.-Phys.

Reinhard Haselsberger Dipl.-Phys.

Institut für Physikalische und Theoretische Chemie Technische Universität München Lichtenbergstrasse 4, 85748 Garching (Germany) Fax: (+49) 89-289-13026

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Alexander Ogrodnik Priv.-Doz. Dr.

Alexander Ogrodnik Priv.-Doz. Dr.

Institut für Physikalische und Theoretische Chemie Technische Universität München Lichtenbergstrasse 4, 85748 Garching (Germany) Fax: (+49) 89-289-13026

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Bernd Giese Prof. Dr.

Bernd Giese Prof. Dr.

Institut für Organische Chemie der Universität St.-Johanns-Ring 19, 4056 Basel (Switzerland) Fax: (+41) 61-2671105

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Maria E. Michel-Beyerle Prof. Dr.

Maria E. Michel-Beyerle Prof. Dr.

Institut für Physikalische und Theoretische Chemie Technische Universität München Lichtenbergstrasse 4, 85748 Garching (Germany) Fax: (+49) 89-289-13026

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We thank Joshua Jortner, Notker Rösch, and Alexander Voityuk for stimulating discussions and critical reading of the manuscript. W.B.D. greatly appreciates a postdoc fellowship from the Alexander von Humboldt Foundation. Financial support from the Volkswagenstiftung is gratefully acknowledged.

Abstract

Hole transfer from an excited, DNA-intercalated injector (1), to either G or to the “traps” GG or GGG occurs with similar rates, and always results in oxidation of the proximate guanine residue. These results indicate that charge trapping in GG or GGG must occur by a relaxation mechanism (structural and/or energetic) which is inherent in these sequences in DNA duplexes.

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